KEGG   Solenopsis invicta (red fire ant): 105202217
Entry
105202217         CDS       T03916                                 
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105202217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soc03019]
    105202217
   03016 Transfer RNA biogenesis [BR:soc03016]
    105202217
Enzymes [BR:soc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     105202217
Messenger RNA biogenesis [BR:soc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     105202217
Transfer RNA biogenesis [BR:soc03016]
 Prokaryotic type
  tRNA degradation factors
   105202217
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase KH_1 S1 DUF1840 Herpes_UL25
Other DBs
NCBI-GeneID: 105202217
NCBI-ProteinID: XP_011168924
Position
13:1997695..2002627
AA seq 771 aa
MIALTCFRLPKYRRSVFLTFKNLRKNGNVCYVRFSSASDKNVGTETVTLSDGKHLHFSTG
RYARFADGCAVASLGDTSVMVTAVCQRQSSTSSFLPLVVDYRQKAAAAGRIPTNFLRREL
GPSEHEILTSRVIDRSIRPLFPEGFYFNTQIMCNMLAIDGMNDPDVIAINGASAALSVSD
IPWNGPVGAVRLGMIDNEIIVNPTRRQIQDSILNLIITAAKQNLIIMLEGSANEILEQQL
RKAIKLGVKECQSIVAAITNLQKTCGKTKRVLETSEQQQDDSLNSSVRELSEAKLQDIFS
NHTHDKISRDNAVNDLRNNVIEILRNDNADLDVKLAESIFGKVVKDVFRTLILEKGVRCD
GRPMDGIRDISCQVDLFNPLHGSALFQRGQTQVMCAVTLDSLQSALKMDTISMLISGMKE
KNFFLHYEFPPYATNETGHASRAGRRELGHGALAEKALRPVLPKDYPFTIRLTSEVLESN
GSSSMATVCGGSLALLDAGIPISSPTAGVAIGLVTKCNETNTNIENYKILTDILGIEDYL
GDMDFKIAGTKRGFTALQADIKISGVPLKIIMECIQQATNAKLQIIKTMNTVIREPRQTR
KDKMPVVDNLEVPIHQRGKFLGIGGMNLKKILLETGVHIYPHDENTYSIFAPNEDAMTEA
KEMIENVLQKDREPILEFGAIYTAKIVEIRETGVMVTLYNNMIPTLLPNSQLDQRKILHP
SALSLEVGQDIQVKYFGRDPVSGQIRISRKVLQKPTLTPKTLHRDDATEKT
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgatagcacttacgtgttttaggttaccaaagtaccgtagatcggtgtttttgacgttt
aaaaatttacgtaaaaatggaaatgtgtgttacgtcaggtttagcagtgcaagtgacaag
aatgtcggtacagaaactgtcacgttgtctgatggcaagcatctccacttctctacaggc
aggtatgcacgtttcgctgatggttgcgcagttgcatctttgggagacacttctgtcatg
gttacggcagtctgtcagcgtcagtcttccacctcctcgttcctgccactcgtcgtggac
tacaggcagaaggcggcggcggctggtcgcataccgaccaacttcctgcgaagggaactt
ggcccaagcgagcacgagatccttaccagcagggtcattgatcgatccataagaccattg
ttcccagaagggttctacttcaacactcagataatgtgcaacatgctggccatcgacggt
atgaacgaccccgacgtgatcgccattaacggcgcctccgcggctctcagcgtttctgac
attccgtggaatggccctgtgggcgccgtcagactcggtatgattgacaatgagataata
gtcaatcctaccagacgtcaaattcaggacagtatattgaatcttattatcaccgcggcc
aaacaaaatctaattatcatgctggaaggttcagccaatgagatactggagcaacagttg
agaaaggcgataaagctcggtgtcaaggagtgccagagtatcgtggcagcaataacaaat
ttgcagaagacgtgcggcaaaacgaaaagagtactcgaaactagcgagcaacaacaggac
gatagtttgaatagttccgtgagagaactctctgaagcaaagctgcaggacatattttcg
aatcatacgcatgataaaatatcgagagataacgcagttaacgatctcagaaataatgtt
atcgagatattgcgaaacgataacgcagatttggatgttaaactggcggaaagtatcttt
gggaaagttgttaaagacgtattcaggacgttgattttagagaagggagtcagatgcgat
ggtcgtccaatggatggcatacgcgacatatcgtgccaagtagaccttttcaaccctctt
catggttcggctttatttcaaaggggtcagacccaggtcatgtgcgccgttactttggac
tctttgcaaagtgcacttaaaatggacaccatttcaatgttgattagcggcatgaaggag
aagaacttctttcttcactacgaatttccaccttatgcaactaacgaaacgggacacgcg
agtcgagcgggtcgccgagaattgggacatggcgctttggcggagaaagccttgcggccg
gtacttccaaaggattatccgttcactataagactgactagtgaagttctagaatcaaat
ggttcctcctcaatggctaccgtctgcggtggaagtttggcactgcttgatgcaggtata
ccaatatcttcgcctacggctggcgtggctattggccttgtgactaaatgtaatgagacc
aatacaaatattgagaactacaagatactgaccgatatattgggaattgaggattacctt
ggggacatggatttcaaaatagcaggtaccaagcgaggattcactgcgctgcaggccgat
ataaagatatcaggagttcctttaaaaattataatggagtgcatacagcaagcaacaaat
gctaaattgcaaataattaagactatgaacacggtaatacgggaaccgcgacaaacaagg
aaggacaagatgccggtggtcgataacttagaagttcctattcatcaaagaggaaagttt
cttggaattggtggaatgaacctgaagaaaatacttttggaaaccggagtgcacatatat
ccacacgatgagaacacctactcgatatttgcgcccaacgaagacgcgatgaccgaggcc
aaagaaatgatagagaacgttttgcaaaaggatcgtgagccgattttggagtttggcgcc
atttatactgcgaaaatagtggagattcgggaaaccggggtcatggtgacgttatataac
aacatgataccgacattactacccaattctcaattagatcagcgtaaaatcttgcatcct
agcgctctatcacttgaagtcggtcaagacatacaagtcaaatatttcggacgagatcca
gtgtccggacagataaggatatcgcgaaaggtactgcaaaaaccgactttgactccgaaa
actttgcatcgcgatgacgcgacggaaaaaacgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (58)   

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