KEGG   Solenopsis invicta (red fire ant): 105204557
Entry
105204557         CDS       T03916                                 
Name
(RefSeq) nuclear RNA export factor 2
  KO
K14284  nuclear RNA export factor
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03008  Ribosome biogenesis in eukaryotes
soc03013  Nucleocytoplasmic transport
soc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105204557
   03015 mRNA surveillance pathway
    105204557
   03008 Ribosome biogenesis in eukaryotes
    105204557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soc03019]
    105204557
   03009 Ribosome biogenesis [BR:soc03009]
    105204557
Messenger RNA biogenesis [BR:soc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105204557
   mRNA cycle factors
    Stress granule specific factors
     105204557
Ribosome biogenesis [BR:soc03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    105204557
SSDB
Motif
Pfam: TAP_C NTF2 UBA_4 LRR_4 LRR_6 LRR_8
Other DBs
NCBI-GeneID: 105204557
NCBI-ProteinID: XP_011171979
Position
3:30327716..30330537
AA seq 545 aa
MASPIKLETNPPTTSQTGAIPPWEPHRITYLKPSFDVTEMALACRRDLWHKFIIFDGGLY
MRNEVLRAFITACEPALLVPIMYTIEDKNKSTFLAKCGGNAIENLVKQGMCITLPGGQEL
RMDIVLGYLGAQELRVNTNKIIAEALHARYEPMKKVFNLDDFENEKALGSIFCPISIPKI
FDMVLRCSKLGIISNNRESQQTRLPVRELSLRYNKLRAIILFDKFFSYHLTKLDLRHNQI
LDVEYLRYFCEFKISELWLDGNPLCTRYTTSQEYVQAVKNVFPHLQKLDGVVIGMEQKFV
PNIQSNYLSNGTKIPLIRQFVKHFFTLYDQEDRIVMHGLYDKNAFYSMTFGGTSNHVHKE
IIKTFSTNRNLLKFADYAKCHEFLFWGSEKIITALQRQPPTTHDFKTFHVDLLHEDDNHL
VISVQGLFSFRLVICPPMLFNRTFIIIRKEDNEYCIVNDQYYIDSTFTNAGNEVKFEPRP
VPKFTPTVLSVSEKEQLIRFLHELTTMNVRHCYKYLAEANWDIKSAITMFMKHYSVNDVP
PQAFE
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggcatcgccaataaaattggaaacaaatccaccaacaacgagtcaaactggagccata
cctccatgggagccccacaggatcacctacctcaaaccatccttcgacgtcacagagatg
gcccttgcatgccgcagggacctttggcacaagtttatcatctttgacggcggtttatac
atgcgcaacgaagtcctgcgcgcattcataactgcatgcgagccggcgctcctggtgccg
attatgtacactatcgaggacaagaataaaagtacgtttctcgcgaaatgcggcggcaat
gcgatagaaaacctcgtaaagcaggggatgtgtataacgctgcccggtggccaggagttg
cgcatggacatcgtgctggggtaccttggtgcgcaggagctgcgggtgaacacgaacaag
atcatagcagaggccttgcatgctcggtatgagccgatgaagaaggtgtttaatctggac
gacttcgagaacgagaaggcccttggttcgatattttgcccaatctccattccaaagatc
tttgatatggtcctgcgttgcagcaagttaggcatcataagcaacaatcgcgagtcccag
caaacgcgactgcctgtgcgcgagttgagcttgaggtacaacaagctcagagccatcatc
ctattcgacaagttcttcagctaccatctgaccaaattagacctgcgacacaatcagatc
ctagacgtggagtatctgcgttacttctgcgagtttaagataagcgagctctggttggac
ggaaatccactgtgcaccaggtacaccacctctcaggaatatgtacaggcggtgaaaaac
gttttcccacatttgcagaagttggacggggttgtcatagggatggaacagaaattcgtg
ccgaacatacagagtaattatctcagtaatggaacgaaaattcctctgatcaggcaattt
gtcaagcacttcttcacgctatacgatcaagaggatagaatagtaatgcatggcctgtac
gataaaaacgcattctattccatgacgtttggcggtacatcgaatcacgtgcacaaagag
atcatcaaaacgttttccacaaatagaaatctgttgaaattcgccgactacgctaagtgc
cacgagttcttgttttggggatctgaaaagataatcaccgccctgcaacggcaaccaccg
acgacgcacgatttcaagacgtttcacgtcgacttgttacacgaggacgataatcactta
gtcatttcagtgcaagggctattttcatttcgactggtaatctgtccgcctatgctattc
aacagaaccttcatcatcatacgaaaagaagacaatgaatactgtattgtcaatgatcag
tattacatcgatagtacattcactaatgcaggtaacgaagtaaaattcgaaccaagaccc
gtgcctaaatttactccaacggtgctcagtgtgtcggagaaagaacaactaattagattt
ttacatgaacttaccacaatgaatgttcgacactgttacaaatatcttgcggaggcgaat
tgggatataaaaagtgcaatcactatgtttatgaagcattattcggtcaatgacgttcct
ccacaagcttttgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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