KEGG   Sodalis praecaptivus: Sant_3246
Entry
Sant_3246         CDS       T03004                                 
Symbol
truD
Name
(GenBank) TRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
sod  Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:sod00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sod03016]
    Sant_3246 (truD)
Enzymes [BR:sod01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     Sant_3246 (truD)
Transfer RNA biogenesis [BR:sod03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Sant_3246 (truD)
 Prokaryotic type
    Sant_3246 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AHF78238
UniProt: W0I1B3
Position
complement(3706192..3707241)
AA seq 349 aa
MTDDLDYHRLHWLLGKPAATGRVKAEAADFQVREQLGFAPDGEGEHLLVHLRKTGYNTPD
VAEALAAFAGIPARAVSYAGLKDRHAVTEQWFCLHLPGKSDPDFAAFKLAGCTILAAARH
RRKLRIGALKGNAFTLTLREISDGEDVEARLKRICDEGVPNYFGHQRFGHQGNNLTLALR
WANNALRIKDRSKRSFTLSAARSALFNKVVSQRLAQLGPARLLNGDALQLTGRGSWFVAS
TAEMPALTARLAARELSLTAPMPGEGALGALDEAEAFEHACLATQPALMALLARERLTPA
RRALLLQPEGLSWRWQDPATLTLSFSLPAGSYATAVVRELLDAPADIAH
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgaccgacgacctggattatcaccggctgcattggctgctcggcaagcccgccgcgacc
ggtcgcgtgaaggccgaggcggcggatttccaggtgcgcgagcagcttggtttcgcgccc
gatggcgaaggggagcacctgctggtgcacctgcgtaaaaccggctacaacacgcccgac
gtcgccgaagcgctggcggcgttcgccggcatccccgcccgcgcggtcagctacgccggg
cttaaagatcgccacgccgtcaccgaacagtggttttgcctgcatctgcccggcaaaagc
gatcccgacttcgcggcctttaaactcgccggctgcactatcctcgccgccgcccgccat
cgacgtaaactgcgtatcggcgccctcaagggcaacgcctttaccctgacgctacgtgag
ataagcgatggtgaggatgtggaggcgcggctgaaacgcatttgcgatgaaggggtgcca
aactatttcggccatcagcgctttggtcatcagggcaataatctgacgctagcgctgcgc
tgggcgaataacgccttgcgcatcaaagaccgcagcaaacgcagctttacgctttctgcc
gcccgcagcgcgttgttcaataaggtggtcagccaacgcttggcgcagttggggccggcg
cgtctattgaacggggacgccctgcaattgaccggccggggtagttggtttgtggcaagc
accgcggagatgccggcgttgaccgcgcggctggcggcgagggagctctccctaacggcg
ccgatgccgggggagggcgcactgggcgcccttgacgaagccgaggcgtttgaacacgcc
tgcctcgcgacgcagccggcgctgatggcgttgctggcgcgtgaacggctaacgcccgcg
cggcgcgcgctgctgcttcagccagaagggttaagctggcgctggcaagatcccgcgacg
ctgacgctttctttcagcctgcctgccggcagttatgccacagcggtagtgcgtgaattg
ctggacgctcccgccgatatcgcccactag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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