KEGG   Sodalis praecaptivus: Sant_3301
Entry
Sant_3301         CDS       T03004                                 
Symbol
mrcB
Name
(GenBank) Penicillin-binding protein 1b
  KO
K05365  penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
Organism
sod  Sodalis praecaptivus
Pathway
sod00550  Peptidoglycan biosynthesis
sod01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sod00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Sant_3301 (mrcB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:sod01003]
    Sant_3301 (mrcB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sod01011]
    Sant_3301 (mrcB)
Enzymes [BR:sod01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     Sant_3301 (mrcB)
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Sant_3301 (mrcB)
Glycosyltransferases [BR:sod01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   Sant_3301 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:sod01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   Sant_3301 (mrcB)
SSDB
Motif
Pfam: Transgly PBP1_TM UB2H Transpeptidase UvrB_inter
Other DBs
NCBI-ProteinID: AHF78293
UniProt: W0I1G7
Position
complement(3773093..3775624)
AA seq 843 aa
MSGDDREPIGRHGRPSGRKAPRKAAPRRRRDDDYDDDDRWQDDDDDDEEEYVMPPRKGRG
GAPRKKRRLLGWVIRLVLLFVVVIAIYGVYLDAQVRHRIDGKVWQLPAAVYGRMVSLEPG
MSYSRSDMATLLEGMQYREVSRITRPGEFTVRGNSIELLRRPFDFPDGKEGQIHARMTFA
KNQLLEIKNQDTQRNFGFFRLDPRLITMLQSPKGEQRLFVPRAGFPDLLVDTLIATEDRH
FYEHDGISLSSIGRAFLANITAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALI
VDYRYSKDRILELYLNEVYLGQSGGDQIRGFPLASLYYFGRPVDELSLDQQAMLVGMVKG
ASLYNPWRNPKLALERRNLVLKLLENQQIIDGELYNMLSARPLGVQPRGGVLTPQPAFMQ
MVREELQSKLGDKINDLSGVKIFTTLDPLSQDAAEKAVEAGVPALRAGRGVKDLEAAMVV
VDRFSGEVRAMVGGAEPQFAGFNRAMQARRSVGSLAKPATYLTALSEPDKYRLNTWIADE
PITLKQPNGSLWSPKNYDRQFRGKVMLVDALTNSLNVPTVNLGLSVGLDRITATLVKLGI
PSSVLNPVPSMLLGAISLTPMEVAQEFQTIASGGNHATLSAVRSVIGEDGTVLYQSFPQA
ERVVPAQAAYLTLYAMQQVVVRGTSRSLSVKFPSSHLAAKTGTTNDLRDSWFAGIDGKEV
SIAWVGRDNNGPAKLTGANGALTLYRRYLENQAPLTLNLTPPEGISQMSIDYAGNFVCNG
GSAMRTLPVWTDDPQSLCQPAQAQVQPQPDAASSGQPQQSAPPQDEQKDSNGVANWIREM
FGK
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgtctggggatgaccgtgaacctatcggacgtcatggacgaccgtcaggccgcaaggct
ccgcgcaaggctgcaccgcgccgccggcgggatgatgattacgatgatgatgaccgctgg
caggatgatgatgatgatgacgaagaggagtacgtgatgccgccgcgaaagggaagggga
ggcgcgccgcgcaagaaacgccggctgctgggctgggttatccgcctcgtgctgctgttc
gtcgtcgttatcgctatctatggcgtgtatttggatgcgcaggtccgtcaccgcatcgat
ggcaaagtctggcaactcccggcggcggtttatggccgcatggtgagtttggagccggga
atgtcctacagccgcagcgacatggcgacgttgctcgaaggcatgcagtaccgcgaggtg
tcgcgaattacccggccgggcgaattcaccgtgcgcggcaacagcattgagctgctgcgc
cggccgttcgatttcccggacggcaaagaggggcaaatccatgcccgtatgacgttcgcc
aaaaatcagctcctggagatcaaaaaccaggacacccagcgtaatttcggctttttccgc
ctcgatccgcgtcttatcaccatgttgcaatcgcccaagggcgaacagcggctgttcgta
ccgcgcgccggtttcccggacctgctggtggataccctgatagccaccgaagaccggcat
ttctacgagcatgacggtatcagcctctcctccatcggccgcgcctttctggccaatatt
accgccggtcgcgcggtgcagggggggagtacgctaacgcagcagctggtgaaaaacctg
tttttgaccaacgaacgctcgctgtggcgcaaggccaatgaagcctatatggcgttgatc
gtcgattaccgttacagcaaggatcgcatcctggagctgtatctgaacgaggtgtatctc
ggccagagcggcggcgatcagattcgcggtttcccgctggccagcctgtactatttcggc
cgtccggtggatgaactcagtctcgatcagcaggcgatgctggtggggatggtgaaaggc
gcgtcgctgtataatccttggcgcaaccccaagctggcgctggagcgccgcaatctggtg
ctgaaactgctggagaatcagcaaatcatcgacggcgagctgtataacatgctcagcgcc
cgcccgctgggggtgcagccgcgcgggggggtattgacgccgcagccggctttcatgcag
atggtgcgcgaagagctgcaaagcaagctgggcgacaaaatcaacgatctctccggcgtc
aagatcttcaccaccttggatcccctttcgcaggatgcggcggaaaaagcggtggaggcg
ggcgtgcccgcgttgcgcgccgggcgcggcgttaaggatctggaggccgcgatggtggta
gtcgatcgcttcagcggcgaagtgcgcgccatggtcggcggggcggagccgcaattcgcc
ggctttaaccgcgcaatgcaggcgcggcgctcggtgggttcgctggcaaaaccggccacc
tatctgaccgcgctgagcgagccggataaatatcggctcaatacctggattgccgatgaa
ccgattaccctcaagcagccgaacggcagcctatggtcgccgaaaaactacgatcggcag
ttccgcggtaaagtgatgctggtggatgcgttgaccaattcgcttaacgtgccgacggtc
aacctcggcctgtcggtggggcttgatcgtattaccgctaccctggtgaagcttggcata
ccgtcctcggtgctgaacccggtcccctccatgctgcttggcgccatcagcctcacgccg
atggaagtggcgcaggagttccagaccatcgccagcggcggtaaccatgccacgctgtcg
gcggtgcgctcggtgataggggaggacggcaccgtgctgtatcaaagcttcccgcaggcg
gagagggtggtaccggcccaggccgcttacttgacgctgtatgcgatgcaacaggtggtg
gtgcgcgggacatcgcgttcgctgtcggtgaaattcccgtcttcgcatctggcggcgaaa
accgggaccactaacgatttgcgcgatagctggttcgccggtatcgacggcaaagaggtg
tccattgcctgggtcggccgcgataacaacggtcccgccaagttgaccggcgccaacggc
gcgctgacgctgtatcgtcgttatctggagaaccaggcgccgttgacgctgaacttgacg
ccgccggagggcatcagccagatgtccatcgactatgccggcaattttgtctgtaacggc
ggcagcgcgatgcgcacgttgccggtgtggacggacgatccgcagtcgctatgccagccg
gcccaagcgcaagtgcaaccacagcctgacgccgcgtcgagcgggcaaccgcagcaaagc
gctccgccgcaggatgagcagaaagacagcaacggcgtggcgaactggattcgggagatg
ttcggcaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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