KEGG   Sodalis praecaptivus: Sant_3860
Entry
Sant_3860         CDS       T03004                                 
Symbol
ssb
Name
(GenBank) Single-strand DNA-binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
sod  Sodalis praecaptivus
Pathway
sod03030  DNA replication
sod03430  Mismatch repair
sod03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sod00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sant_3860 (ssb)
   03430 Mismatch repair
    Sant_3860 (ssb)
   03440 Homologous recombination
    Sant_3860 (ssb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sod03032]
    Sant_3860 (ssb)
   03400 DNA repair and recombination proteins [BR:sod03400]
    Sant_3860 (ssb)
   03029 Mitochondrial biogenesis [BR:sod03029]
    Sant_3860 (ssb)
DNA replication proteins [BR:sod03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Sant_3860 (ssb)
DNA repair and recombination proteins [BR:sod03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     Sant_3860 (ssb)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Sant_3860 (ssb)
Mitochondrial biogenesis [BR:sod03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    Sant_3860 (ssb)
SSDB
Motif
Pfam: SSB tRNA_anti-codon
Other DBs
NCBI-ProteinID: AHF78832
UniProt: W0I221
Position
complement(4431224..4431760)
AA seq 178 aa
MASRGVNKVILVGNLGQDPEVRHMPNGGAVANITLATSESWRDKQTGETKEKTEWHRVVL
FGKLAEVAGEYLRKGSQVYIEGSLQTRKWQDQSGQDRYTTEVVVNIGGTMQMLGGRQGGG
AGGNAGGAQQGGWGQPQQPQGNNAQFSGGNAPAARPAQNSAPAPSNEPPMDFDDDIPF
NT seq 537 nt   +upstreamnt  +downstreamnt
atggccagcagaggcgttaataaagtgattctagtcggaaacctgggccaggatccggaa
gtccgccatatgcctaacggtggtgcggtagccaacatcaccctggccacctctgagagc
tggcgcgacaagcagaccggcgagaccaaggagaaaacggaatggcatcgcgtggtgctg
tttggcaagctggccgaggtggcgggtgaatatttgcgtaagggctcccaggtgtatatt
gagggatcgctacagacccgcaaatggcaagatcagagcggccaggatcgatacaccacc
gaggtggtggtcaatatcggcggcaccatgcaaatgctcggcggtcgacagggcggcggg
gcgggcggtaacgccggtggcgcgcagcagggtggctgggggcagcctcagcagccgcag
ggcaataacgcgcagttcagcggcggcaacgcgccggcggcgcgccccgcgcagaactca
gcgcctgcgcccagcaacgaaccgccgatggacttcgatgacgatattccgttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system