KEGG   Sodalis praecaptivus: Sant_3966
Entry
Sant_3966         CDS       T03004                                 
Symbol
priA
Name
(GenBank) Primosome assembly protein
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
sod  Sodalis praecaptivus
Pathway
sod03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sod00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Sant_3966 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sod03400]
    Sant_3966 (priA)
Enzymes [BR:sod01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Sant_3966 (priA)
DNA repair and recombination proteins [BR:sod03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Sant_3966 (priA)
SSDB
Motif
Pfam: PriA-like_WH PriA_3primeBD DEAD PriA_C ResIII Helicase_C PriA_CRR AAA_30 zinc-ribbons_6 TrwB_AAD_bind AAA_19 AAA_22
Other DBs
NCBI-ProteinID: AHF78922
UniProt: W0I2E4
Position
4560437..4562632
AA seq 731 aa
MPVVNVALPVPLARTFDYLLPANAAPAVGGRVRVPFGQRQAIGIVTAIREHSDVALDKLK
PISEVLDDRSLFSDSLWRILNWAIGYYHYPAGEVLFHALPILLRQGKPAEMAPLWQWFAT
EQGRSTLPDSLKRAPKQQQALAALLRGPVYRHQVGELLLADPALQALRAKGLCDLRPQAV
EASDWRPGFGVNGERLRLNTEQATAVGAIRSEDDRFTAWLLAGVTGSGKTEVYLTVLENI
LAKGQQALVLVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLAVWLKARRGECAIVI
GTRSALFTPFARLGIIVIDEEHDSSYKQHEGWRYHARDLAVFRAREENIPIVLGTATPSL
ETLYNVQQKKYRQLTLAKRAGSARPAGQHLLDMKGLPLTHGLSTPLLDKMRAHLQAGNQV
MLFLNRRGFAPALLCHECGWIAECQRCDHYYTLHQHQRQLRCHHCDSQRPLPHQCPQCGS
TQLVAVGLGTEQLEAALTPLFPEVPVTRIDRDTTARKGALEDYLAQVQRGGARILIGTQM
LAKGHHFPDVTLVSLLDVDGALFSGDFRAAERFAQLYTQVAGRAGRAGKQGEVLLQTHHP
EHPLLQTLLHHGYMDFANQTLEERRQAGLPPFTSHILFRADDHDNRQAGLFLDQLRQLLD
ASPLRDNALWLMGPIPALAPKRGGRFRWQLLLSHPSRPHLQRLVAASLPLISTLTQARKV
KWSLDVDPLDG
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgcccgttgtaaacgtcgcattaccggtgccgctggctcggacttttgattaccttttg
cccgctaacgccgcgcctgcggttggggggcgggtgcgggttccgtttggtcaacgccag
gccattggtatcgtcaccgccatccgcgagcacagcgacgtggccctggacaagttaaag
cctatcagcgaagtgctcgacgaccggtcgctgttttccgacagcctctggcgcatactg
aactgggccatcggctactaccattaccccgccggcgaagtgctgttccacgctctgccg
atcctgcttcgtcagggcaagcccgctgagatggcgccgctatggcagtggttcgccacg
gaacaggggcgcagcacgctgcccgatagtctgaagcgagcgcccaaacagcaacaggcg
ctggcggcgctgctgcgcgggccggtttatcgccaccaggtaggcgagctgctgcttgcc
gacccggcgctgcaggcgctgcgcgccaaaggattatgcgatctgcggccccaggcggtg
gaggcaagcgactggcggccagggttcggcgttaacggcgaacggttgcggctgaacact
gaacaggccaccgccgtgggcgctattcgcagcgaggacgatcggttcaccgcctggctg
ctggccggcgtgaccggctccggcaagaccgaggtttatctgacggtgctggagaatatt
ctggccaaagggcagcaggcgctggtgctagtgccggaaattggtctgacgccgcaaact
atcgcccgctttcgtgagcgcttcaatgcgccggtagaggtcctgcattcggggctcaac
gacagcgaacggctggcggtctggcttaaagcgcgacgcggcgaatgcgctatcgtcatc
ggaacccgttcggcattgttcaccccgttcgcccggttggggattatcgtcatcgacgag
gagcacgatagttcttataagcagcacgaaggctggcgctaccacgcccgcgacctggcg
gtttttcgcgcgcgggaagaaaatataccgatagtgctcggcaccgccacgccgtccctc
gaaaccctttataatgtacagcagaaaaaataccgccagctcaccttggccaaacgggcc
ggcagcgcccgaccagccggccagcacttgctggatatgaaggggctaccgctgacccat
ggcctctcaacgccgctgctggataaaatgcgcgcacatctacaggccggcaatcaggtc
atgctgtttcttaaccggcgcggcttcgcgcctgcgctgctgtgccatgaatgcggctgg
atcgccgaatgccaacgctgcgatcactactacacgctacatcagcatcagcgtcaattg
cgctgccaccactgcgacagccagcgcccgctgccgcatcaatgcccacagtgcggctcc
acccagttggtggccgtcgggttaggcactgaacagctggaggcggcgttgacgccgctg
tttccagaggtgccggtgacgcgaatcgatcgcgacaccacggcgcgcaaaggcgcgctt
gaggactatctggcccaggtacagcgcggcggcgcgcggattttaatcggcacccaaatg
ctggccaaaggccaccactttccagatgttacgctggtttcgctgctggacgtggatggc
gcgctgttctccggcgatttccgcgccgccgaacgtttcgcccaactttatacccaggtt
gccggccgtgccggccgcgccggcaaacaaggggaggttttactgcaaacccaccatccc
gagcatcccctgctgcaaacgttgctgcatcacggttatatggacttcgccaatcaaacg
ctagaggaacgccgccaggcgggcctgcctccctttaccagtcatatcctgtttcgcgcg
gacgatcacgacaaccgccaggcggggctgttccttgatcaattacgccagctgctggac
gccagcccgctgcgggataacgccctgtggctcatggggcctatccccgcgctggcgccc
aagcgcggcgggcgttttcgctggcagttgctgttgtcgcacccctcgcgtccgcatttg
caacgcctggtggccgccagtttaccgctgataagcaccctgactcaggcgcgcaaggtt
aaatggtcgctggatgtggatcccctcgacggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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