KEGG   Spinacia oleracea (spinach): 110776320
Entry
110776320         CDS       T05137                                 
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 isoform X1
  KO
K15446  tRNA:m4X modification enzyme [EC:2.1.1.225]
Organism
soe  Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:soe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:soe03016]
    110776320
Enzymes [BR:soe01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.225  tRNA:m4X modification enzyme
     110776320
Transfer RNA biogenesis [BR:soe03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    110776320
SSDB
Motif
Pfam: TRM13 zf-TRM13_CCCH Methyltransf_32 zf-U11-48K Methyltransf_31 PCMT Methyltransf_25 MTS Methyltransf_12 RrnaAD Maf_flag10_N
Other DBs
NCBI-GeneID: 110776320
NCBI-ProteinID: XP_021836566
UniProt: A0A9R0HT55
Position
5:complement(484928..495681)
AA seq 455 aa
MEKRCEYWLPKKKRFCANFPFNDSPFCGNHSIRSNGKWIPCSIDPSHCVLEENMEGHLKR
CPLLKQTQTLSLQPYYQKGINQGTDSEDQDVQFTSEMKRNWVYNLSAPLFYDLLSKIRSL
HASICKDMQFSYKIPNACDIWIKRQNDRKIPYQEKHVRQQASILGNLEDFGALSSSDQAF
SEEQCDRSTLHCYEDDVSAVVEFGAGRGYLTQILADCYGIEKVVLVERKAYKLKADRSLR
QIENLALERLRIDIEDLNLNAVESLKGIPYLAIGKHLCGPATDLTLRCCLSEHCDQDNGK
EPGVRPHLRSIAVATCCHHLCQWKHYTSKQYLKNLGITKEDFHAITWFTSWAVDADHGSD
VSDDGSLPSPIPPHPPSGNEECGGDARGVEGITRNMKAMDRAALGFMCKDIIDMGRLMWI
KECGLEAKLVKYVPSDISPENRLLVAKAGTTTIST
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggagaaacgttgcgaatattggctgcccaagaagaaacgattttgcgccaatttcccc
ttcaatgattccccattctgcgggaatcacagcattaggtccaatggcaagtggattcct
tgctcaatcgacccttcccattgtgtgcttgaagaaaacatggagggtcacttgaagaga
tgcccattattgaaacaaacccagacattgtcactccagccttactaccaaaaggggatt
aatcaaggcacagattctgaagatcaagatgttcaattcacatctgagatgaagaggaat
tgggtttataatttgagtgctcctcttttttatgatttactctccaagatccgttctctt
catgcttccatttgtaaggacatgcagttttcttacaagatacctaacgcttgtgatatc
tggataaagagacaaaatgaccggaaaataccataccaagagaagcatgtccggcaacaa
gcgtcaattctcgggaatttggaggactttggggctttgagcagttctgatcaagctttt
tcagaagaacagtgtgatcgtagcacattgcattgctatgaagatgatgtctctgctgtg
gttgagtttggagctggtaggggttacttaacacagatattggctgattgttatgggatt
gaaaaggtagtcctggttgagcgcaaggcgtacaagctcaaggcagatcggagtttacga
caaatagagaacttagcattggagcgtttaagaatcgacattgaagatttaaatctgaat
gctgtcgagtctttgaagggaataccttacttggcaattggtaaacatctatgtgggcct
gctacagatttgactcttagatgttgtctcagtgaacattgtgatcaagataatgggaaa
gagcctggtgttcgtcctcatctcagaagcatagctgtggcgacctgttgccaccatctc
tgccaatggaaacactacacaagtaaacaatacctaaagaacctaggaatcactaaagag
gatttccatgctatcacatggttcaccagttgggcagtagatgctgatcatgggtcagat
gtctctgatgatggttctttgccatctcctattccacctcacccaccaagtggtaatgaa
gagtgtggtggagatgctagaggagttgaaggtattacaaggaacatgaaagcaatggac
agggcagcattagggttcatgtgcaaggatataattgatatggggaggttgatgtggatt
aaggaatgcggactggaagctaaacttgtcaagtatgtcccatcagacatttcccctgaa
aatcgtctgctggttgcaaaggcaggaacaacaaccatctctacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (33)   

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