KEGG   Spinacia oleracea (spinach): 110781733
Entry
110781733         CDS       T05137                                 
Name
(RefSeq) probable galacturan 1,4-alpha-galacturonidase SALK6
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe00040  Pentose and glucuronate interconversions
soe01100  Metabolic pathways
Module
soe_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:soe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    110781733
Enzymes [BR:soe01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     110781733
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix NosD GlfT2_domain3
Other DBs
NCBI-GeneID: 110781733
NCBI-ProteinID: XP_021841481
UniProt: A0A9R0JNP8
Position
5:complement(3571929..3573546)
AA seq 421 aa
MAAKSNYTCTLFFLAFYLLILGIKGVLVPAGDTIVFDITKNGAKPNTDVAKDFVRAWTDA
CASKERSKVLVPKGEYLLGPITLKGPCQTPTIIEILGNFKASPNLESFKGEDAWFEIDNV
DSLTITAPKGAGVFDGQGQEGWKNNHCIQNDTSCHSFPHNFRFNSLTNSKISGITSLNSK
LFHMTLQGCKNVEMTDMTIIAPGDSPNTDGIHIGRSNDITIRGAKIGTGDDCISFGDGSK
NMLVENVTCGPGHGISVGSLGRYPNEEPVSNITVRDCTFNNTMNGVRVKTWPDSYESSAT
LLYFEGITIQNVKFPVIVDQEYCPQNNCNKKTPSKVKISDIRFKNVKGISGTKDAVQLIC
SSNTPCDKVELTEIDLTYNGKDGPALSTCKFVKPVLTGKQNPQACDAPATPIVEATEADS
E
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgctaaatcaaattacacttgcacattgtttttccttgcattttatttgctcatc
ctaggaataaaaggtgtgctcgttcctgcgggtgataccattgtatttgacataaccaag
aatggagctaagcctaatactgatgttgcaaaggatttcgtgcgagcgtggactgatgca
tgtgcatcaaaagaacgaagcaaggtgttagttcctaaaggagaatacttgctaggtccc
attacgcttaaaggtccatgtcagacaccaaccataatagaaattttaggcaattttaag
gcctctccaaatttggaatcatttaagggggaagatgcatggtttgagatagataacgtc
gatagtctaacaatcacagctccaaaaggagcaggtgtgtttgatggtcaaggacaagaa
ggttggaaaaataaccattgcatccagaatgacaccagctgccactcctttcctcataac
tttaggttcaactcgttaacgaattcaaaaattagtggcataacttcactaaatagcaag
ttgtttcacatgaccctccaagggtgtaagaacgtggaaatgactgacatgactataatc
gccccaggagacagccctaacacggacggcattcacattggacgttcaaatgatattacc
attagaggagccaagattggcactggagatgattgtatctccttcggtgatgggtcaaag
aacatgcttgttgagaatgtcacttgtggtcctggccacggaattagcgtggggagtcta
ggtagataccccaacgaggagccagtgtcaaatatcactgtaagagattgtacattcaat
aacactatgaatggtgttcgagttaaaacatggcctgactcttatgaatcctctgccact
ttgctgtattttgagggtatcactatccaaaatgttaaatttcctgtcattgttgatcaa
gaatattgcccccaaaataattgcaacaaaaagaccccgtccaaagttaagatttctgac
attcgattcaagaacgtgaagggaatatcaggcacaaaggatgcagtgcaactaatttgt
agcagcaacacaccctgtgacaaagtggaactcactgaaatagacttaacatacaatggc
aaagatggtccagcgctttcaacgtgtaaatttgttaagcctgttcttactggaaaacag
aacccacaagcttgtgatgcacctgctaccccaattgttgaagcaactgaagcagactcg
gagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system