KEGG   Spinacia oleracea (spinach): 110798154
Entry
110798154         CDS       T05137                                 
Name
(RefSeq) cyclin-H1-1 isoform X5
  KO
K06634  cyclin H
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03022  Basal transcription factors
soe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110798154
  09124 Replication and repair
   03420 Nucleotide excision repair
    110798154
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soe03021]
    110798154
   03400 DNA repair and recombination proteins [BR:soe03400]
    110798154
Transcription machinery [BR:soe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     110798154
DNA repair and recombination proteins [BR:soe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     110798154
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B
Other DBs
NCBI-GeneID: 110798154
NCBI-ProteinID: XP_021859005
UniProt: A0A9R0K685
Position
4:complement(19230340..19244574)
AA seq 335 aa
MADFHTSTQRAKWIFTEQELNEKYKAANQRAIQSLEKYGTTSLAIDADGSFSHPKSQKDT
EGIKQSRVKPLKVEEEKVLHVYYENKIQEVCGAFKFPHKIQATALTYYKRFYLCWSVMEH
HPKSVMLTCIYLACKIEENHVSAEELGKGIQQDHRMILDNEMLVLQSLGFDLIVYTPYRS
IEGFINDMEDFCYATSGEIDMLPELHQRAVFEADKAVLTDAPLLFPPGQLALAVLRRANS
ELLVLDFERYLQSILSRQQSEHTISELDQGLNAIEFLIKRIKMSDNEEMKRVAKKLKSCQ
DSGSRDDSKKRDKKSKHKSKRNPQEIQTPQSAAAE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggcggatttccatacatctactcaaagagccaagtggattttcactgaacaagaactg
aatgagaaatacaaagctgctaatcaaagagctatacaatcattagagaagtatggtaca
acaagtttggcaattgatgctgatgggtctttttcacatcctaaaagccaaaaggataca
gaaggtattaagcagtctcgtgtgaagccccttaaggtggaagaggaaaaagtgttacat
gtgtattatgaaaacaagattcaagaagtatgtggagccttcaaatttccacataaaatc
caggctactgcacttacgtactataagaggttctatctctgctggtcagtcatggaacac
catccgaaatctgttatgttaacctgtatatatttagcttgtaagatagaggagaatcat
gtttcggctgaggagcttggaaagggtatccagcaggatcaccgaatgattctagataat
gagatgctagtcctccagagtttgggatttgatcttattgtatatacaccgtaccggtcg
attgaagggtttattaatgatatggaggatttttgctacgcgacaagtggcgaaattgac
atgttgccggaattacatcaaagagctgtctttgaagctgataaagcagtccttacagat
gcaccacttttatttcctccaggccagttggcattagctgtactccgtagagcaaattct
gagctcttagttcttgattttgagagatatctacaaagcattctctcacgccaacaatct
gaacacactatttcagagctggaccagggtctcaatgctatagaatttctgataaagaga
attaaaatgagtgataatgaggagatgaagcgtgttgctaagaagctgaaatcttgtcaa
gattctggatctcgtgacgacagtaagaagagggacaagaagtcaaaacacaagtctaaa
agaaatccacaagaaattcagacgcctcaatccgctgctgcagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (15)   
   RefSeq(nuc) (13)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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