KEGG   Spinacia oleracea (spinach): 110799797
Entry
110799797         CDS       T05137                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe04120  Ubiquitin mediated proteolysis
soe04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110799797
   04120 Ubiquitin mediated proteolysis
    110799797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:soe04121]
    110799797
Enzymes [BR:soe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110799797
Ubiquitin system [BR:soe04121]
 Ubiquitin ligases (E3)
  U-box type E3
   110799797
SSDB
Motif
Pfam: Ufd2P_core U-box
Other DBs
NCBI-GeneID: 110799797
NCBI-ProteinID: XP_021860760
UniProt: A0A9R0K7Y4
Position
2:complement(64005403..64022529)
AA seq 1045 aa
MATKKPQRSPAEVEDIILRKIFLVSLVDSMELDSRVVYLELTAAEVLSEGKELLLCRDLM
ERVLIDRLSNDFPNAESPFTYLVGCYRRAYEEGKKIMSMKDKDLRSEMESVCNQAKKLAV
SYCRIHLGNPDMFPGVDEAPFSDNANPMGKKLSSLLPLIYSDVGGAVIDSFGGSGSNGGI
TSPPGFLDEFFGEGDFDSLDPIFTYLYDNLREKVVRESALGNFQQPMRALLYLVGFPAGA
KSLVIHKWWMPPGSFSNGRAMEVASILGPFFHISALPDIALFKSHPDVGQQCFSESSSRR
QADLLSSFTTIKTVMNNLYDGLHEVLLCLLKKPDTRENILEFLAAVINSNSSRAHLQIDP
LTCASSGMFVNLSAVMLRLCEPFLDANLMKRDKIDPNYVFYSNRLALRGLTALHASSEEV
TAYISELNNGRVERSTESSVTDNRSLTSLEATGSGGPPIENVQSVSRSGDKVKYPFICEC
FFMTARVLNLGLLKAFSDFKHLVQDISRSEDSLATFKAMQEQAPNRQLEMDITRLEKEIE
SYTQEKFCYEAQILRDGGLIQRALSFCRLEVVWLVGLVGGFKLPLPSPCPMEFACMPEHF
VEDTMELLIFASRIPKALDGVILDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNGWMPRR
SGSSATANLFEGHQLSLQYLVKNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQV
PSHRNVWRLIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKTLEAEMSNTAEWEQR
PAQERQERTRTFHSQENIIRLDMKLANEDVSLLAFTSEQITAPLLLPEMVERVASMLNYF
LLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLAKGDVGNVFPAAISRDGRSYNE
QLFGAAADVLIRIGEDGRIIQEFVELGVKAKAAAAEAMDAENALGDIPDEFLDPIQYTLM
KDPVILPSSKVTLDRPVILRHLLSDSTDPFNRSPLSPDMLIPDHELKARIEEFVRSHSTR
NHDDVLLQSTKGTIQTPTTDMHLID
NT seq 3138 nt   +upstreamnt  +downstreamnt
atggcgaccaagaagccccaaagatcgccagcagaagtcgaggacataattctgcggaaa
atatttcttgtgtctctcgtagattcaatggaattggattcccgtgtagtttacctggaa
ttaactgctgctgaagttctcagcgagggcaaggaattgctgttatgtagggatttgatg
gaaagggttttgattgaccggctttcaaatgatttcccgaatgccgaatcaccttttact
tatttagttggatgttataggcgtgcttatgaagaagggaagaagattatgagcatgaaa
gataaggatttgaggtctgagatggagtcagtatgtaatcaagccaagaaattggcggta
tcgtattgtaggattcacttaggtaaccctgatatgtttcctggtgtagatgaagctcct
tttagtgacaatgctaatccgatggggaagaaactgtcgtcattgttgcctttgatttat
tcggatgttggtggcgccgttattgatagctttggaggatctggaagtaatggtgggatt
actagcccaccagggtttttggatgaattctttggggagggggattttgatagtttagac
ccgatttttacttatttgtatgataacttgagggaaaaagtggtaagggaatcggctttg
ggaaattttcagcagccgatgagggctttgttatatctggttggtttcccagctggggca
aagtctttagttattcataaatggtggatgccaccagggtcattttcgaacggtcgtgct
atggaggttgctagcattttgggtcctttctttcatatcagtgcactacccgatattgct
ctttttaagagccatcctgatgttggtcagcagtgcttctctgaatcatcatctcgtcgt
caagctgatctactatcgtcattcactaccataaagaccgtgatgaataatttgtatgat
ggtctgcatgaggttcttctttgtcttctgaaaaaaccagatactcgagaaaatatttta
gaatttttagcagcagtaatcaatagcaattcctcgagggcacatttgcagattgatcca
ttgacctgtgctagctctggcatgtttgtcaatctcagtgctgttatgctcaggctttgt
gagccatttttagatgctaatctcatgaaacgggataaaatcgatcctaactatgtattt
tacagcaatcgtttggctttaagaggattaaccgcactgcatgcttcatcagaagaagtt
acggcttatatttctgagcttaataacggaagagtagaacgttctaccgaaagtagtgtt
acagataaccgctcgttgacatctttggaagccactggttctggtggtcctcctattgag
aatgtgcaatcagtgtcaagaagtggtgataaagttaaatatcccttcatatgtgaatgc
ttctttatgacagcaagggttcttaacttggggttattaaaggcattttcagatttcaag
catctagttcaggatatctcaagatcggaagattccctggctacctttaaggccatgcaa
gagcaagctccaaatcgtcagttggagatggatataactcgtcttgaaaaagagattgaa
tcatatacacaagaaaagttttgttatgaggcacaaatacttagggacggggggcttatt
cagcgcgctttatcattttgccggttagaggtggtctggttggttggcctagttggtggt
ttcaaactgcctctgccatctccttgtcctatggaatttgcttgtatgccagaacatttt
gtggaggatacaatggaattgctgatatttgcatctcgaatcccaaaagctttggatggg
gtcattttggatgatttcatgaactttatcatcatgtttatggctagccccgaatatatt
agaaatccttatttaagagcaaaaatggtcgaagtgctgaatggttggatgcctcgtagg
agtggctcttctgcaacagctaatctatttgaaggacatcaattgtctttgcaatatctt
gtcaagaatcttctaaagctgtacgttgacattgaattcacgggatctcatacacagttc
tatgataaatttaatattcgtcacaatattgcagagcttttggaatatctttggcaggtt
cctagtcatcgcaatgtttggagactgattgcaaaggaagaagaaaagggcgtctaccta
aatttcttaaatttcctgattaacgacagcatctacctccttgatgaaagccttaataaa
atccttgaactcaaaacgctagaagctgagatgtccaatactgctgaatgggaacaaaga
cccgctcaagagaggcaggagagaactcggactttccattctcaagagaatataattaga
cttgatatgaaattggcaaatgaagatgttagtctgctggctttcacttcagaacagatt
actgcgcctttgcttcttccggaaatggttgaaagagttgccagcatgcttaattacttt
ttgctacaattagtgggtccacaaaggaaatcgttgagcttgaaggatcctgagaagtac
gagttccgtccaaaacatctgcttaaacagattgtcaacatctatgttcatctggcaaag
ggagatgtgggaaatgttttccctgctgcaatttcaagggatgggcggtcttacaatgaa
cagttgtttggcgctgcagctgacgttcttatacggataggagaagatggaagaattata
caagagtttgtcgaacttggtgtaaaagctaaagctgcggctgctgaagccatggacgca
gagaatgctcttggtgacatacctgatgaattcttggacccaattcagtacacgctgatg
aaggacccggttattttgccttcttcaaaagtcacccttgatcggcctgtcatcttgagg
catctactgagtgacagtactgatcctttcaaccgttccccgctttctccagacatgcta
attcctgatcacgagcttaaggccagaattgaggaatttgtcaggagccattcaactagg
aaccatgatgatgtacttctgcaaagcaccaagggaacaatacaaaccccaacaactgat
atgcacttgattgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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