KEGG   Spinacia oleracea (spinach): 110803360
Entry
110803360         CDS       T05137                                 
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
  KO
K11838  ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    110803360
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:soe01002]
    110803360
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:soe04121]
    110803360
Enzymes [BR:soe01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     110803360
Peptidases and inhibitors [BR:soe01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   110803360
Ubiquitin system [BR:soe04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    110803360
SSDB
Motif
Pfam: USP7_ICP0_bdg UCH USP7_C2 MATH UCH_1 Nitroreductase
Other DBs
NCBI-GeneID: 110803360
NCBI-ProteinID: XP_021864562
UniProt: A0A9R0JB52
Position
5:complement(31399182..31413535)
AA seq 1117 aa
MTVMTPAPIDQEDDEMLVPHSDIAADNHQPMEVVAQAEPANNPENQPAEDPPSSRFTWRI
ENFTRLNAKKHYSDAFVVGGFKWRILIFPKGNNVDYLSMYLDVADSPSLPYGWSRYAQFS
LAVVNQIHNKYSVRKDTQHQFNSRESDWGFTSFMQLSELYDPSRGYLVNDTVLVEAEVAV
RKIVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDIPSAS
IPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECVNVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYHAEQNGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDR
EDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDL
KRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCNVDEKDIAEH
LRERLKREQEEKEHKKKEKAEAHLYTIIKVARDGDLTEQIGKDIYFDLVDHDKVKSFRIQ
KQMPFNIFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPVEETQSVGQLREVSNK
VHNAELKLFLEIELGIDLRPIPPPEKTKDEILLFFKHYDPEKEEMRYVGRLFVKATGKPG
EILGKLKELAGYAADDEIELYEEIKFEPTVMCEHIDRKLTFRGSQLEDGDIVCFQKSLSA
ESAEKCRYPDVPSFLDYMHNRQVVHFRSLERPKEDDFCLELSRLHTYDDVVERVARQLGL
DDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHATKDEVTIHTIRLPKQSTVGDVLNDLKTKVELSHPDAELRLLEVFYHKIYK
IFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETAQNQMQIQNFGEPF
FLVIHEGETLSEVKVRIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDTDVVSSRFQRRDVY
GAWEQYLGLEHADTAPKRTYTANQNRHTFEKPVKIYN
NT seq 3354 nt   +upstreamnt  +downstreamnt
atgactgtaatgactccggctcccatcgaccaagaagatgatgagatgcttgtcccacat
tctgatatagcagctgacaatcaccagcctatggaagttgttgcgcaagctgagcctgct
aataatcctgagaatcaacctgcggaggaccctccatcatccaggtttacatggagaatt
gagaatttcacccggttaaatgccaagaagcattattcggatgcgtttgtcgttggtggt
ttcaaatggcgaatactaatttttcccaaagggaacaatgtggactacctttctatgtat
ctcgatgtagctgattctcccagtttgccttacgggtggagtaggtatgcacagttcagc
ttagctgtggtcaatcaaattcataacaagtattccgtgagaaaagatacgcagcatcag
tttaattctcgcgaaagtgattggggatttacgtcttttatgcaattaagtgagttatat
gaccccagcagaggatatcttgtaaatgatactgttcttgtggaggctgaggttgctgtt
cgtaagattgttgactattggtcctacgattcgaaaaaagaaacaggatatgttggactt
aagaatcagggagctacatgctacatgaattctctgcttcagacactttttcacattcct
tactttagaaaggctgtgtatcatatgcctacaactgaaaatgatattccatctgcgagt
attcctctggctcttcagagtttattttataagctccaatacagtgacagcagtgttgca
acgaaagaattgaccaaatcttttggatgggatacttatgattctttcatgcagcatgat
gtccaggagttgaatcgggttctttgtgaaaagcttgaagacaaaatgaagggtactgtt
gttgagggaactattcagcaattgtttgaagggcatcacatgaactatattgaatgtgta
aatgttgattacaaatctacaagaaaggagtccttttatgatcttcagcttgatgtcaaa
ggttgtcgtgatgtttatgcttcttttgataagtatgtagaagttgaacgactggaaggt
gataacaagtatcatgctgaacagaatggtttacaggatgctaggaagggtgtcttattc
attgattttcccccagttcttcaactgcagctcaaaagatttgaatatgattttatgcgt
gataccatggtgaagataaatgaccgctatgaattccctcttgagcttgatctggatcgt
gaggatgggaaatatttatctcctgatgctgatagaagtgtccgtaacctttacacactc
cacagtgttttggtccacagtggtggggtgcatggtggacattattatgccttcataagg
cctactctttccgatcagtggtacaagtttgatgatgaacgagttacgaaggaagatttg
aagagagctttggaggagcagtatggtggagaagaggagttgccgcagacaaatcctggt
ttcaacaacactccattcaagttcacaaaatattcaaatgcgtatatgcttgtttatata
cgtgaaagtgacaaagataagattatgtgtaatgtggatgagaaggacattgcagaacat
cttagagaacgcttgaagagagaacaagaagagaaggagcataagaagaaggagaaggca
gaggcacacctttataccattataaaggttgcacgagatggtgacttgactgagcaaata
ggaaaggatatctattttgatcttgtagaccatgacaaagttaaatcttttcgtattcag
aagcagatgccatttaatattttcaaggaggaggttgctaaagaattcggaatcccagta
caatttcagcggttttggctgtgggcaaagcgccaaaatcatacatataggccaaatcga
ccgttgacacctgtggaagaaacccaatctgttggacagctaagggaagtatctaataaa
gttcataacgcagaacttaaactattcttggaaatagagcttggtatagatttacgacct
attccacctccagaaaagacaaaggatgagattctgttattcttcaagcattatgatccc
gagaaagaagagatgcgttacgttgggaggctttttgttaaggccactggtaaaccagga
gaaattttaggaaagttgaaggaattggctggctatgctgctgatgatgaaattgaatta
tatgaggaaatcaagtttgaaccaactgttatgtgtgaacatattgaccgaaaactcaca
tttcgtggtagccagcttgaagatggggacatagtctgtttccaaaaatccctttcagct
gaaagtgcagaaaagtgccgctatcctgatgttccatcgttcttggactatatgcacaat
cggcaagttgttcatttcagatcattggagagacccaaggaagatgatttttgtctagag
ttgtcaagacttcatacgtatgatgatgtggtggaaagagtagctcgtcagcttggtttg
gacgatccatccaaaattaggctgacttctcacaactgctattctcagcaaccgaagccc
caacctataaagtatcggggtgtggatcatttgtcagacatgctggtccactacaaccag
acttctgacatactgtactacgaagttctggacatacctttgccagaactacaaggctta
aaaactttgaaagtcgctttccatcatgcgacaaaagatgaagtaaccattcacactatt
agactgcctaaacagagtacagtgggagatgttcttaatgatttgaagacaaaggtggaa
ttgtcacatcctgatgctgagctgaggctacttgaagtattttatcacaagatctataag
atattcccacctaatgaaaagattgagaatataaatgatcagtactggacattacgagca
gaagagattcctgaagaagagaagaacctgggtcctcatgatcgacttattcatgtgtac
catttcacgaaggagacagctcaaaaccaaatgcaaatacagaatttcggtgagccattt
ttcttggtgatccatgaaggagaaactttgtctgaggtcaaggtgagaatacaaaagaaa
ttgcaggttccagatgaagagttttccaagtggaagtttgcatttctttcattaggtcgt
ccagaatacctccaggacactgatgttgtgtccagtcgttttcagagaagagatgtttat
ggtgcttgggaacaataccttggattagaacatgctgacacagcacctaaaagaacttac
acagcaaatcagaatcgtcatacatttgagaagcctgtaaaaatctacaattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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