KEGG   Spinacia oleracea (spinach): 110805793Help
Entry
110805793         CDS       T05137                                 

Definition
(RefSeq) DEAD-box ATP-dependent RNA helicase 50
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Organism
soe  Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:soe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soe03041]
    110805793
   03009 Ribosome biogenesis [BR:soe03009]
    110805793
Enzymes [BR:soe01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     110805793
Spliceosome [BR:soe03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    110805793
Ribosome biogenesis [BR:soe03009]
 Eukaryotic type
  90S particles
   Helicases
    110805793
  Pre-60S particles
    110805793
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DEAD Helicase_C ResIII SNF2_N
Motif
Other DBs
NCBI-GeneID: 110805793
NCBI-ProteinID: XP_021867101
Position
Unknown
AA seq 690 aa AA seqDB search
MAATSSSLHSLFTSPPQEFISLLSQNFRSFQPWRPQLSAKPKLPAIPAISSPNTRSANFR
VRAGYKKKPMDTPGAYELIDEKSGERVILWGGVDDVEPSIPSKKVLSWNPSKNQNKSSSA
RENLGGSGLSEPPSVGHKNGISSTTTLRLSKGVGRLKAVKIKSIVRKVSKEKEKTNEHRY
EEPDMDELDDDDSDDDEYDDDDDDPIVSSAPQAVWIRNKNVSVKSGIEQLIDNKSSNKPF
ESKENLTFSKGWNGREPRRSDRGEIRDPKPTRKYDAGSDFFSRKSFRELGCGDDMIEALR
AQDFVRPSHVQAMAYCSVVEGKSCIIADQSGSGKTLAYLAPVIQRLRQEELGGHSKSAPK
SPRAVILVPTAELASQVLQNCRSISKLGVPFRSMVATGGFRQRTQLQSLEQDLDVLIATP
GRFMYLIKEGFLQLTNLRCAVLDEVDILYNDEDFEQALLSLTNKAPVTTQYLFVTATLPV
EIYNKLVETFPDSEVVMGPGMHRTSSGLEEVLVDCSGNEESEKTPETAFSNKKSALLRLA
EESRVSRTIIFCNKIETCRKVENVLRRLDRKENQIRVLPFHSALEQETRLRNMKEFLSPV
TENRSLFLICTDRASRGIDFPSVDHVVLFDYPRDPSEYVRRVGRTARGAGGVGKAFVFVI
GKQVSLARRIIDRNQKGHPLHEVPSSAYEW
NT seq 2073 nt NT seq  +upstreamnt  +downstreamnt
atggcggcgacctcatcatctttgcacagcctcttcacttctcctccacaggaattcata
tcactactttcacagaacttccgttcatttcagccatggcgtcctcaactttccgcaaag
ccgaagcttcccgccattcccgccatttcctcgccaaatacaagaagtgcgaattttagg
gttagagctggttacaagaagaagccaatggatacgccgggggcatacgagttgattgat
gagaagagtggagagagagtgattctgtggggtggagttgatgatgttgagccttcaatt
ccatcaaagaaagttctttcatggaatcctagtaagaatcagaataaatcctcgagtgcc
agggaaaatctaggaggcagtggcctcagtgagcctccatctgttggtcataaaaatggt
atttcgtctactactactctgagattgtccaagggtgttggaaggttgaaagctgtcaag
ataaaaagcattgtaagaaaggtttcaaaggaaaaggagaaaaccaacgagcataggtac
gaggaaccagatatggatgaactagatgatgatgactctgatgatgatgaatatgatgat
gatgatgatgatcctattgtatcgtcggctcctcaagccgtctggatcagaaataaaaac
gtttctgttaagagtggcattgagcagttaatagacaataaatcatcaaataaacctttc
gagtctaaggaaaacttgactttttcaaaaggatggaatggtagagaacctagacgtagt
gataggggtgaaataagagacccaaaacctactcgtaaatatgatgctgggagtgacttt
ttcagccgaaaatcatttagggaattaggctgtggcgatgacatgattgaggctctgaga
gcacaggactttgttcgcccttcacacgttcaggcaatggcatattgttctgttgtagaa
gggaagagctgcattatagctgatcaaagtggatcaggaaaaacattggcataccttgct
ccagttattcaacgtcttagacaagaagagcttggaggacatagtaagtcggcaccaaaa
agtccacgagctgtaatattagtcccaactgctgagcttgcttcccaggttctgcaaaat
tgtcgatccatctcaaaacttggtgttcccttccgctctatggttgcaacaggaggtttc
cgacagcgaactcagttgcagagtcttgaacaggatttagacgtgcttattgccacaccg
ggtcgtttcatgtacttaatcaaagaagggtttttgcagttaacaaatcttagatgtgct
gtgttggatgaagttgatatactctataatgatgaggattttgaacaagctttgctgagt
ctaactaacaaggcaccagttactacgcagtatctctttgtgactgccacattacctgtg
gaaatttataacaaacttgttgagaccttcccagatagtgaggtagtcatgggacctgga
atgcaccggacgagttctggccttgaagaggttcttgtagattgtagtggaaatgaagag
tcagaaaagaccccagaaacagcattttccaataagaagtctgctcttttgaggcttgca
gaggagagtcgagtttctaggactattatcttctgcaacaagattgagacttgtcgaaag
gttgagaatgtcctgaggcgtcttgatagaaaggaaaatcagatacgggttcttccattt
cattctgctctggagcaagaaacaaggctcaggaatatgaaggagttcctcagtccggtt
acagaaaaccgttctctgtttctaatttgtactgacagagcatctcgaggaatagacttt
cccagtgtggatcatgttgtactatttgactaccctcgtgatccaagtgaatatgtacgg
cgtgttggaagaacagcaagaggtgctggaggtgtagggaaggcctttgtgtttgtgata
ggtaagcaagtttctctggcaagaaggatcattgacagaaaccaaaagggacatcctttg
catgaagtgccttcctctgcttatgaatggtga

DBGET integrated database retrieval system