KEGG   Serratia odorifera: NCTC11214_04253
Entry
NCTC11214_04253   CDS       T06612                                 
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
sof  Serratia odorifera
Brite
KEGG Orthology (KO) [BR:sof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sof03016]
    NCTC11214_04253 (rnb)
Enzymes [BR:sof01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     NCTC11214_04253 (rnb)
Transfer RNA biogenesis [BR:sof03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    NCTC11214_04253 (rnb)
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 PilZ
Other DBs
NCBI-ProteinID: VDZ62874
UniProt: A0A447KY36
Position
1:complement(3888267..3890201)
AA seq 644 aa
MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRI
VATVHTEKEREIAEPETLVEPFLSRFVGRVQKKDDRLSIVPDHPLLKDAIQCRPGRELTH
DFQAGDWAVAEMRRHPLKGDRSFHAELTDFITNADDHFAPWWVTLARHNLEKEAPEMAAT
HQPTATLAREDLTGLDFVTIDSASTEDMDDALFVQENADGTLQLTIAIADPTAFVDQGSA
LDDIARKRAFTNYLPGFNIPMLPRDLSDNLCSLRANERRPVLACRVTIAADGALGSDIHF
FAAEIESKAKLVYDEVSDWLDGIAGWQPPSEAIAQQITLLKRVCDARNGWRHQHALVFKD
RPDYRFVLGEKGDVLDIITEQRRTANRIVEECMIAANVCAAVVLRDRLGFGIYNVHTGFD
PALVEQAVSVLQANGVQAEAEKLLTLEGFCELRRHLDAQPTQFLDSRIRRFQTFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIISEQAAQKPQEAITVQLAERRRLNRM
AERDVGDWLYARFLQDKAGTNTRFKAEIIDVTRGGLRVRLLENGAVAFIPAPFIHAVRDE
LVCSQDTGTVQVKGDVVYRQSDSLQVTIAEVRMETRSVIARPAP
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgtttcaagataacccgctgctggcgcagcttaaacagcaacttcactctcaaaccccg
cgtgttgaaggcgtagtaaaagggactgagaaaggctttggctttttagaggtcgatggc
caaaagagctattttatcccgccgccgtacatgaaaaaagtcatgcatggcgaccgcatc
gtcgccaccgtccacaccgagaaagaacgtgaaatcgccgagccggaaaccctggtcgag
ccattcttgtcacgctttgtcggtcgggtacagaagaaagacgatcgcctgtcaatcgtg
ccggatcacccgttgctgaaagatgcgattcaatgtcgtccagggcgtgaactgacacat
gacttccaggccggcgattgggcggtggcggaaatgcgtcgacacccgctgaaaggtgac
cgtagcttccatgccgagctgactgatttcattaccaacgccgacgatcactttgcgcca
tggtgggtcacgctggcacgacataatctcgaaaaggaagcgccagaaatggcggctacc
catcagccgaccgccactctggcgcgtgaagatctgaccggtctggattttgtcaccatc
gacagcgccagcaccgaagatatggatgatgcgctgtttgttcaggagaacgccgacggt
accctgcaactgaccatcgctatcgccgacccgaccgccttcgtcgatcagggcagcgcg
ctggatgacattgcccgcaaacgcgcctttaccaactacctgccgggtttcaacatcccg
atgttgccgcgcgacctgtccgacaatctgtgctcgctgcgcgccaatgagcgtcgcccg
gtactggcttgccgcgtgaccatcgccgctgacggcgcgttgggcagcgatatccatttc
ttcgccgccgaaatcgaatcgaaagccaaactggtgtatgacgaagtctccgactggctg
gacggcattgccggctggcaaccgccaagcgaggctatcgcccagcagattaccctgctc
aagcgggtctgtgatgcgcgcaacggctggcgtcaccagcatgcgctggtgttcaaggat
cggccggactatcgctttgtcctcggcgagaaaggcgacgtgctggacatcatcaccgag
caacgtcgtaccgccaaccgcatcgttgaagagtgcatgattgccgccaacgtctgcgcc
gccgtggtgctgcgcgatcgtctggggttcggcatctacaacgtgcacaccggcttcgac
ccggcgctggtggaacaggcagtcagcgtactgcaggccaacggggtacaagccgaggcc
gaaaaactgctgacgctggaaggcttttgcgagctgcgccgtcaccttgacgcacagccg
acgcaattcctcgacagccgtattcgccgtttccagaccttcgccgaaatcagcaccgag
ccgggcccgcactttggcctcgggctggaagcttacgccacctggacgtcacccatccgt
aaatacggcgatatggtcaaccaccgcctgctgaaagccattatcagcgaacaggccgcg
cagaaaccgcaggaagcgatcaccgtccaattggcggagcgtcgccgtctgaaccggatg
gcggaacgcgacgtcggcgattggctgtatgcccgttttctgcaagacaaggccggcacc
aatacccgcttcaaggcggaaatcatcgacgtcacccgcggtggactgcgtgtccgtttg
ctggaaaatggcgccgtggcgttcatccctgctccattcatccacgcggtgcgcgacgag
ctggtgtgtagccaggataccggcaccgtgcaggtgaaaggcgacgtggtttatcgccag
agcgacagcctgcaagtcaccatcgccgaagtgcggatggaaacccgcagcgtgatcgcc
cgcccggcaccataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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