KEGG   Sulfurisphaera ohwakuensis: D1869_00535
Entry
D1869_00535       CDS       T06310                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
soh  Sulfurisphaera ohwakuensis
Brite
KEGG Orthology (KO) [BR:soh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:soh03016]
    D1869_00535 (truD)
Enzymes [BR:soh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     D1869_00535 (truD)
Transfer RNA biogenesis [BR:soh03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    D1869_00535 (truD)
 Prokaryotic type
    D1869_00535 (truD)
SSDB
Motif
Pfam: TruD PgaPase_1 DUF4652 DUF3139
Other DBs
NCBI-ProteinID: QGR15843
UniProt: A0A650CDB5
Position
complement(79664..80755)
AA seq 363 aa
MLGMEKYFINEDWSPLKVFINRPDGFRVIEEISYKPATEWKGSIQGKYAVYLLRKRGIDH
FTVISEISKILHSKIHYIGIKDTNAITEQIVYTTNVKNIIEKYENDKFLLTFLGYSNSKF
NHTGNIFEIEIETDDIKELEKRVNKLRSIKYLPAYIGYQRFGTKRPITHIIGKMLVLREW
QNAIDFLVGYPFESESELVKKARYAYMKGDLKEALELFPKRFRDERIAIKLLLRNENYFN
ILRNLQTPLIFYIEAYQSYLFNKYLSRIMDHTKIDENLVIKIPTSYDSCDSICREIFREE
GLLSINFKIKELKLNVKDLVRKAYTLIRNLTIKDKKITFALDRGIYATIVIREVARTDPR
LFT
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgctcgggatggagaagtattttataaatgaagactggagtccactgaaggtttttatc
aatagacctgatggttttagggttattgaggagatctcttataaacctgctacggaatgg
aaaggttccatacaaggcaaatatgctgtatatttacttagaaagcggggaatagatcat
tttactgtgataagtgaaatatcaaaaatattacatagcaagatacattatataggaatt
aaggatacaaatgctattacagaacaaatagtatatacaactaatgtaaaaaatattatt
gagaagtatgaaaatgacaagtttcttttaaccttcttaggttatagcaattctaaattt
aatcatactgggaacatatttgagatagagatagaaactgatgatattaaagagcttgag
aaaagagtaaataaactaaggagcataaaatatttaccagcttatataggctatcaacga
tttgggacaaaaagacctataactcacattataggtaaaatgttggtgttgagagaatgg
caaaatgctattgattttttggtaggatatccttttgaaagcgaaagcgaacttgtaaaa
aaagctagatatgcttatatgaaaggcgatcttaaagaagcactagaattattccctaaa
agatttagagatgaaagaatagctattaaactgcttcttaggaatgagaattattttaac
atattaagaaatttacaaactccacttatattttacatagaagcttaccaatcatattta
tttaataagtatctatcaaggataatggatcatactaagatagatgagaatttagtaata
aaaattcctacatcatatgatagttgtgatagtatttgtagagaaatatttagagaagaa
ggactactaagtattaattttaagattaaggaactaaaactaaatgttaaggatcttgta
agaaaagcatatactctaattagaaatttaaccataaaagataaaaaaattacatttgct
ttagatcgtggaatttatgcaactattgttataagagaggttgcgagaactgatccaaga
ctttttacttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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