KEGG   Streptococcus cristatus: I872_01475
Entry
I872_01475        CDS       T02649                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
soi  Streptococcus cristatus
Pathway
soi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:soi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    I872_01475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soi03019]
    I872_01475
   03016 Transfer RNA biogenesis [BR:soi03016]
    I872_01475
Enzymes [BR:soi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     I872_01475
Messenger RNA biogenesis [BR:soi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     I872_01475
Transfer RNA biogenesis [BR:soi03016]
 Prokaryotic type
  tRNA degradation factors
   I872_01475
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 KH_2 PCB_OB S1_2 TRAM SPATA25 DNA_pol_B DUF4404
Other DBs
NCBI-ProteinID: AGK70416
Position
298892..301090
AA seq 732 aa
MTKQVFKTVFAGRELVVETGQVAKQANGSAVVRYGESTVLTAATMSKKMATGDFFPLQVN
YEEKMYAAGKYPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
DASPQMAAMFGSSLALSISDIPFNGPIAGVQVGYVDGEFIINPSKEQKEVSLLELTVAGT
KEAINMVESGAKELSEDIMLEALLKGHEAVKELIAFQEEIVAAFGKEKAEVELLHVDKEL
QAEIVAAYNSDLQKAVQVEEKLAREAATQAVKDQVTAVYEEKYANHEEFDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAEVDYLPRVHGSGLFTRGQTQALSVLTLA
PMGETQIVDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALEQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGSNYTV
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIEGITAEILTEALAQAKKARFEILDLI
EATIPAPRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQAAINRAKEIIAGLVREAKVDEVYHAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
RTNNVEDLVQIGDFVDVKVIKIDEKGRVDASMKALLPRPPKPDKPKRDHDKHQEKGHFHK
KHEEAPKAKSEE
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgacaaaacaagtttttaaaaccgtttttgcaggtcgtgagctggtagttgaaaccggt
caggttgcaaaacaggcaaatggcagcgccgttgttcgatatggagaaagtaccgtttta
actgcggcaaccatgtccaaaaagatggctactggtgactttttcccattgcaggtcaac
tatgaggaaaaaatgtatgcggctgggaaataccctggtggctttatgaaacgggaaggc
cgtccgtcaacagatgcgactttgactgcccgcttgattgaccgcccgattcgtcctatg
tttgcggaaggtttccgcaatgaagttcaggttatcaatactgttctttcttatgacgaa
gatgcttcgcctcaaatggctgctatgttcggtagttctctggctctttctatttcagat
attccttttaacggccctatcgcaggagttcaggtcggctatgtagatggtgaattcatc
atcaaccctagcaaggaacaaaaagaagtttcacttttggaactaactgtagctggtacc
aaagaggctatcaacatggtagaatccggagctaaggagctgtctgaagatatcatgctg
gaagctcttctcaaagggcatgaagcggtcaaagaattgattgccttccaagaagaaatc
gttgcggcatttggtaaggaaaaagcagaagtcgaattgctgcatgttgataaagagcta
caggcagagattgtcgcagcctacaacagcgacctccaaaaggctgttcaggtagaagaa
aagctggcgcgtgaagccgcgactcaggctgtcaaagaccaagtcacagcggtttatgaa
gagaaatacgcgaaccacgaagaattcgaccgtatcatgcgtgatgtggctgaaatcttg
gagcaaatggagcatgcagaagtgcgccgtttgattactgaagataaggtccgtcctgac
ggtcgtaaggttgatgaaatccgtccgctggatgcggaagtggattacctgccgcgcgtg
catggttctggtctctttactcgtggtcaaacccaagccttgtctgttctgactctggca
ccaatgggcgaaacgcagattgtggacggattggatccggaatacaagaaacgcttcatg
caccactataatttcccgcaatactctgttggtgagacaggccgttatggtgctcctggt
cgtcgtgaaattggacacggtgctcttggggaacgtgccttggagcaagtcttgcctagt
ttagaagagtttccttacgctatccgtctggtagcagaagtcttggagtcaaacggttca
tcctcccaagcctctatctgtgcaggtactttggctctgatggccggtggtgtgccgatt
aaggcaccggttgctggtattgccatgggcttgatttcagatggtagcaactacacggtt
ctgacggacattcaaggtttggaagaccattttggcgacatggactttaaagtggctggt
actcgcgaagggattacagctcttcaaatggatatcaagattgaaggaattacagcggaa
atcttgactgaggctctggctcaggctaagaaagcccgctttgaaattctggacttgatt
gaagcgacgattccagctccgcgtcctgagttggctccaactgctccgaaaatcgatacc
atcaagattgatgtggacaaaattaagattgtcatcggtaaaggtggcgaaaccattgac
aagattatcgctgaaacaggtgttaagattgatatcgacgaagaaggaaatgtatcaatc
tactctagcgatcaagcggccattaaccgtgccaaggaaatcattgctggcttggttcgc
gaagctaaagtggatgaagtttaccatgccaaggttgttcggattgagaaattcggtgcc
tttgtcaacctctttgacaagaccgatgccctcgttcacatctctgaaatggcttggact
cgaaccaacaatgtcgaagacttggtacaaattggtgattttgtcgatgttaaggtcatt
aaaattgacgaaaaaggccgcgtagatgcgtctatgaaagctctcttgccacgtccgcct
aagccagacaagccaaagagagaccacgataaacatcaggaaaaagggcattttcataag
aaacatgaagaagcccctaaagctaaatcagaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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