KEGG   Solimonas sp. K1W22B-7: D0B54_10720
Entry
D0B54_10720       CDS       T05591                                 
Name
(GenBank) Rne/Rng family ribonuclease
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
sok  Solimonas sp. K1W22B-7
Pathway
sok03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sok00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D0B54_10720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sok03019]
    D0B54_10720
   03009 Ribosome biogenesis [BR:sok03009]
    D0B54_10720
Enzymes [BR:sok01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     D0B54_10720
Messenger RNA biogenesis [BR:sok03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D0B54_10720
Ribosome biogenesis [BR:sok03009]
 Prokaryotic type
  rRNA processing factors
   D0B54_10720
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AXQ29129
UniProt: A0A346N0P2
Position
complement(2344128..2347118)
AA seq 996 aa
MKRILINATQREELRVAIVDGQKLHDLDIEHASREQKKGNIYKGRITRVEPSLEACFVDY
GGERHGFLPVKEIVRSYFKGDGKNLRDQLDEGQEIIVQVEKEERGNKGAALTTFVSLAGR
YLVLMPNNPRAGGISRRADGDEREEAKEALNQLNLPDGMGLIIRSNGVGRTVEELQWDLD
HRVGTWNAIIAEAAKRQGPFLIYQENNIVMRALRDYLRADIGEVIVDNPEIYEEAREQLQ
YSTPQDLPKLKQYNDETPLFQRFQVESQIELAHERNVRLPSGGSIVIDHTEALTAIDINS
AKATGGRDIEETAFNTNLEAAEEIARQLRLRDLGGLIVVDFIDMASSKNQKEVEKRLERA
VEMDRARIQLGRISRFGLLELSRQRLRPTLAEHTQVACPRCSGRGHIRSVESLALSILRL
IEEEAMKERTGRVIAQVPVDVGTFLLNEKRLNVREIEARCRVHIAVVPNPTLHTPNFEIK
RVRADHLAQDGNSGISYVLAQNFDAAAQEEMAKPQAPTRPLQEPAVKQIVPATPAPIVIK
QEIVAAPAPVQMVAVPTESVWTRLMRWLGFGAQPVTEAPPAKAPQDQRRRDEQRRDGRGG
NNRGERGERGRDQNRDQNRGQQQGQQRRDGQQGPRRDGQQQNPQQQKNRDGQQQNPPQKN
RDGQQNPPRRDGQQPQQNRGEGQQQNQQKGRDGQQQDRQQQNPQRQGRDGQQRRDGRPER
PQQTEQLPLTAEGAAAELAAEAAGLEPEGTEGHAPGGRSLRGRRNRRNRGRGGEGRGEGQ
LPAAAGGVVALTEDDVLSGGVASSDIPAAEPANEAVQAPAGDSGEVTISSAIEPAPEAEA
ESDATAVAEVQATPVETQAPVEAQDESPAPPAETAAPVAAPAFVAAQPEPVAEAPVVETP
VVETPVTAAPVAEAPAAVAETVEAEAAASAPAAEAEEEVQTVAMDSPEDVAEAEESARKF
RASAPASDYFKLFEEPAPAAAETETSGEQKPDTTHS
NT seq 2991 nt   +upstreamnt  +downstreamnt
atgaaacgcattctgatcaatgccacgcagcgcgaagagctgcgcgtggcgatcgtggac
gggcaaaagctgcatgaccttgatatcgagcacgcctcccgcgagcagaagaaaggaaac
atttacaaaggccgcatcacccgcgtagagcccagcctcgaagcctgcttcgtcgactac
ggtggagaacgccacggcttcctgccggtaaaggaaatcgtccgctcctatttcaagggc
gacggcaagaacctgcgcgaccagctcgacgaaggccaggaaatcatcgtccaggtcgag
aaggaagagcgcggcaacaagggcgcggccctgaccacgttcgtctccctggccggccgc
tacctggtgctgatgcccaacaatccgcgcgccggcggcatttcgcgccgcgccgacggc
gacgagcgcgaggaagccaaggaagccctgaaccagctgaacctgccggacggcatgggg
ctgatcatccgctccaacggcgtcggccgcacggtcgaggaactgcagtgggacctcgac
caccgcgtcggcacctggaacgcgatcatcgccgaggccgccaagcgccaggggcccttc
ctgatctaccaggaaaacaacatcgtgatgcgcgcgctgcgcgactacctgcgcgccgat
atcggcgaggtgatcgtcgacaaccccgagatctacgaggaagcccgcgagcagctgcag
tattcgacgccgcaggacctgcccaagctcaagcagtacaacgacgaaaccccgctgttc
cagcgcttccaggtcgagagccagatcgaactggcgcatgaacgcaatgtgcgcctgccc
tccggcggctcgatcgtgatcgaccataccgaggccctgaccgcgatcgacatcaactcc
gccaaggccaccggcggacgcgacatcgaggaaaccgcgttcaataccaatctggaagcg
gccgaggaaatcgcccgccagctgcgcctgcgggatctcggcggcctgatcgtcgtcgac
ttcatcgacatggccagctccaagaaccagaaggaagtcgagaaacgcctggagcgcgcg
gtcgaaatggaccgcgcccgcatccagctgggccgcatctcgcgcttcggcctgctggag
ctgtcgcgccagcgcctgcgcccgacgctggccgagcatacccaggtggcttgcccgcgc
tgcagcggccgtggccacatccgcagcgtcgagtcgctggcgctgtcgatcctgcgactg
atcgaagaagaggcgatgaaggagcgcacagggcgcgtgatcgcccaggtgccggtcgac
gtcggcacgttcctgctcaacgagaagcgcctcaacgtacgcgagatcgaggcgcgttgc
cgcgtgcacatcgcggtggtgccgaacccgacgctgcacacgccgaacttcgagatcaag
cgcgtgcgcgccgatcacctggcgcaggacggcaactccggcatttcctacgtgctggcg
cagaacttcgacgccgcggcccaggaagaaatggccaagccgcaggcgccgacgcgtccg
ctgcaggagccggcggtcaagcagatcgtgccggcgacgccggcgccgatcgtgatcaag
caggagatcgtcgccgcccctgcgccggtgcagatggttgcggtgcccaccgagtcggtc
tggacccgcctgatgcgctggctcggcttcggcgcccagccggtcaccgaggcccctccg
gccaaggctccgcaggaccagcgccgccgcgacgagcagcgccgcgacggtcgtggcggc
aacaaccgcggtgagcgtggcgagcgtggccgtgaccagaatcgcgaccagaaccgcggc
cagcagcagggccagcagcgccgtgacggccagcagggcccgcgccgcgatggccagcaa
cagaatccgcagcagcagaagaatcgcgacggccagcagcagaacccgccgcagaagaac
cgcgacggccagcagaacccgccgcgccgcgatggccagcagccgcagcagaaccgcggc
gaaggccagcagcagaaccagcagaagggtcgcgacggccagcagcaggaccgtcagcag
cagaatccgcagcgccagggccgtgatggccagcagcgccgcgacggccgcccggagcgt
ccgcagcagacggagcagctgccgctgaccgccgaaggagctgccgccgaactggccgcc
gaggccgcaggcctggagccggaaggcacagagggtcatgcgccgggtggacgcagcctg
cgcggccgccgtaaccgccgtaaccgcggccgtggtggtgaaggccgtggcgaaggccag
ctgccggcagccgccggcggcgtggtcgcgctgaccgaggacgatgtcctgtccggcggc
gtggcctccagcgacatcccggcagcggaacccgctaacgaagctgtccaggccccggcc
ggcgacagcggcgaagtgacgatctcctccgccatcgagcccgcgccggaggccgaggcc
gagagcgacgccaccgcggtggcagaggtacaggccacgccggtcgagacgcaggcgccg
gtcgaggcacaggacgaatcgccggccccgcccgccgagacggcagcaccggtggcggcc
cccgccttcgtcgctgcgcagcccgagcctgtggccgaagcccctgttgtcgaaacacct
gttgtcgaaacacctgttactgcagcccccgtcgccgaagcccccgcagcggtcgccgag
acggtagaggccgaagccgcggcctccgctccggcggccgaggccgaggaagaggttcaa
acggttgcaatggacagccccgaagatgtcgccgaagcggaagaaagcgcgcggaagttc
cgcgccagcgccccggcctccgactacttcaagctgttcgaagagcctgcccccgcagcg
gccgagacagaaacgtccggcgaacagaagccagacaccacccactcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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