KEGG   Shewanella oneidensis: SO_0506
Entry
SO_0506           CDS       T00099                                 
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD
  KO
K03182  4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
Organism
son  Shewanella oneidensis
Pathway
son00130  Ubiquinone and other terpenoid-quinone biosynthesis
son01100  Metabolic pathways
son01110  Biosynthesis of secondary metabolites
son01240  Biosynthesis of cofactors
Module
son_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:son00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    SO_0506 (ubiD)
Enzymes [BR:son01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.98  4-hydroxy-3-polyprenylbenzoate decarboxylase
     SO_0506 (ubiD)
SSDB
Motif
Pfam: UbiD UbiD_C UbiD_N
Other DBs
NCBI-ProteinID: AAN53587
UniProt: Q8EJG1
Position
complement(532474..533940)
AA seq 488 aa
MSFKDLRSFIDHLEANGELKRISYPVDPHLEMTEIADRVLRAQGPALLFENPTNHSMPVL
ANLFGTPKRVAMALGKDDPLALREVGELLAFLKEPEPPRGFKDAISKIPMFKQALNMPPK
TVRNPACQQVVKTGDDVDLTQLPIQHCWPGDVAPLVTWGLTITKGPRKSRQNLGIYRQQL
LGKNKLIMRWLSHRGGALDFADFKEQFPGERYPVVVALGSDPVTILGAVTPVPDAMSEYA
FAGLLRGERTEVCKALSCDLEVPASSEIILEGYIDPNEMAEEGPYGDHTGYYNETDKFPV
FTVTHITHRKDPIYHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIIDFYLPPEGCSY
RMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVVVDDDVNCRDWNDVIWAITTRMDP
KRDTVMIDNTPIDYLDFASPVVGLGSKMGLDATNKWEGETNREWGTPIVMDPKVKQKIDS
IWDELGIS
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgagttttaaggatttacgcagctttattgatcatctggaagccaatggcgaactcaaa
cgcattagctaccccgttgatcctcatttagaaatgacagagatcgccgatcgcgttctg
cgcgcccaaggccctgcacttctgttcgaaaatcccaccaatcactccatgccagtactg
gccaacctatttggtacacccaaacgcgttgccatggcgctgggtaaagatgatccgtta
gcgctacgcgaagtcggtgagctattggcgtttttaaaagaacccgagccaccacgcggt
tttaaagatgcgatttcaaaaatccctatgttcaagcaagccttgaatatgccgcccaag
actgtacgtaatcctgcctgtcagcaagtggttaaaaccggtgatgatgttgatttaacc
cagttaccgattcagcattgctggccaggcgatgtggcgccgctggtcacatggggctta
accatcaccaaagggccgcgtaagagccgccaaaacttaggcatctaccgtcagcaattg
cttggtaagaataaactcattatgcgttggctctcccaccgtggtggcgcgctcgacttt
gctgattttaaagaacaattccccggcgaacgttaccctgtggttgttgccttaggctcc
gatccagtaaccattttaggcgcagtcaccccagtgcctgatgctatgagcgaatacgcc
tttgcgggactactgcgcggcgagcgcaccgaagtctgcaaagccttaagctgcgattta
gaagtgccagccagcagcgagattatcctcgaaggttatattgaccctaacgaaatggcc
gaagaaggcccctacggcgaccacactggttactacaacgagacggataaattccctgtc
tttaccgtgactcatattactcaccgtaaagatccgatttaccacagcacctatactggc
cgtccaccggatgaacccgccatgcttggggtcgcattaaacgaagtgtttgtgccaatc
ttgcgtaagcaataccctgaaattattgatttttatcttccgcctgagggttgttcgtac
cggatggcggtgatctccattcgcaaacaatatcccggccacgctaaacgggtgatgatg
ggcgcttggtccttcctgcgccagtttatgtataccaaatttattgtggtggttgatgac
gatgtcaattgtcgcgactggaacgatgtgatttgggccattaccacccgtatggaccct
aaacgcgatacggtgatgatcgataacacccctatcgattacctcgattttgcctcccct
gtagtgggcttaggttcaaaaatgggtctcgatgccaccaataagtgggaaggcgaaacc
aaccgcgaatggggcaccccgatagtaatggaccctaaggttaaacaaaaaatcgactca
atttgggatgagttagggatatcgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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