KEGG   Shewanella oneidensis: SO_0639
Entry
SO_0639           CDS       T00099                                 
Name
(GenBank) collagenase
  KO
K01387  microbial collagenase [EC:3.4.24.3]
Organism
son  Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:son00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:son01002]
    SO_0639
  09183 Protein families: signaling and cellular processes
   02042 Bacterial toxins [BR:son02042]
    SO_0639
Enzymes [BR:son01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.3  microbial collagenase
     SO_0639
Peptidases and inhibitors [BR:son01002]
 Metallo peptidases
  Family M9
   SO_0639
Bacterial toxins [BR:son02042]
 Toxins that damage the extracellular matrix
  Hyaluronidases/Collagenases
   SO_0639
SSDB
Motif
Pfam: Peptidase_M9 Peptidase_M9_N PPC
Other DBs
NCBI-ProteinID: AAN53717
UniProt: Q8EJ34
Position
complement(664604..667717)
AA seq 1037 aa
MKQTLLFAAISLAIATPSLAHNHSVQDPNNSVKAKNTAIPSTLAPLASPSAPLNIDVSHR
PLLPTDSLIASPNEPTHSEYLDAHSSQQQALLENSPRSKVSRFAANADCSNFVGKSGQAL
LDELTQSTPQCVGKLFNLKGSDASSVFSEANVSTVANAIAAKAPQYTGVDNQGIESHIYF
VRAALYVQFYHPSDVPAYSSAVKNNLKSALNALFANNAIWTLSDANASVLKEALILIDSA
ELGADFNFVTLKVLNDYNSTWQASFAMNAAANTVFTTLFRAQWNTDMQALFARDHAILDA
LNQFQLNHRDLLGTNAEYVLVNAVRELSRLYYIDAMRPKVTQLVKNILNSTSKNDSSRVL
WFAAAEMADYYDRSNCNAYQICGFKAQLAADSLPFNWKCSDSLKIRAQDLYQDQAKWACG
VLSQQESHFHTILETGMQAVAQDNNDDLELVIFGSSSEYQSLANSIFGINTNNGGMYLEG
SPAGLKNQARFIAYEAEWRQPDFHVWNLQHEYVHYLDGRYNLFGDFSRSVSANTIWWIEG
LAEYISYRDANPAAIAMGETGEFMLSTIFKNTYDSGQDRIYRWGYLAVRFMFENHRDDVR
QILTFLRNNQYAEYQAFMDSIGTRYDNEWRGWLTSGLSTTNNGIVDKGPSDEQANASGRE
GNWAGPAGTISKDYSPCQVSNEAYRYSESASLSLEVPMECIDAKQGRASFSFANSDRSAQ
DIWIKIGGGWGDADIYYDSRGWASAEKNQGYGIGNGNYQVIKVSLNPNELWHYITLEGDF
GGVDMLVSTSELVADTDPDLGDGDTGGEVPSNCGAATINYGKLTLGKDECISGGRNSFYF
WVDADNSQFSVSTTGGTGDANIYFNANTWASASNAQASSVNQGNKESFSFTANRGWRYIT
VDTASEFSGVTFNLKAGGGGSSVPNQIANACATKSPVSYTQLTPGDAVCSANGRNDYYLW
IPEGTSQLEVRSAHGTGDVSLYSGRSWANAQQYEAASTNAGSTKEQIKVNNPSAGWYYIT
LQSEGQSAGVALQVDLR
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgaaacagactctacttttcgcggctattagcttagccattgcaacaccttcgctcgcc
cataaccattcagtacaagacccaaacaattcagtaaaagcgaaaaacacagcaatccct
agtacgctagcaccgttagcttcaccgtcagcgccactcaatattgatgtcagccatcgg
ccgttattgcccactgacagtttgatagcctcacctaacgagccaacacactctgagtac
ctcgatgcacattcttcacaacagcaagcgttgctcgagaactctccgagatcaaaagtc
agccgctttgccgccaatgccgactgtagtaactttgttggtaaatcgggccaagccctg
ttagatgagctaacgcaatccacgccacagtgtgtcggtaaactatttaatctcaaggga
agtgacgcaagcagcgtatttagtgaagcgaatgtatccacagttgccaatgcaattgca
gccaaagcgcctcaatacacaggcgtggataaccaaggtattgagtcacatatttacttt
gtgcgcgccgcgctttatgtgcagttttaccaccccagcgacgtacccgcctacagcagc
gcggtgaaaaacaatttaaaatcagcgcttaatgctctctttgccaataacgccatttgg
acactctccgatgccaatgccagcgttctcaaagaagcactgatcctgattgattccgcc
gaactgggggctgattttaactttgtcaccctcaaagtgctcaatgactacaacagcaca
tggcaagccagctttgcgatgaatgcggccgccaataccgtgtttaccaccttattccgc
gcccagtggaatactgacatgcaggcactgtttgcccgagatcatgccattttggatgcg
ctcaaccagttccaacttaaccacagggacttactcggcaccaatgctgaatatgtttta
gtcaatgctgtcagagagttatccagactgtactacattgatgccatgcgccctaaagtc
acccaattggtcaaaaatattttaaacagcaccagcaaaaatgattccagtagagtgctg
tggtttgcagctgccgagatggcagattactacgatcgcagcaattgtaatgcttaccag
atctgcggtttcaaagcacaattggccgccgatagcttaccgttcaattggaaatgctcc
gacagcctcaagatccgcgcccaagatctttaccaagatcaagctaaatgggcatgcgga
gtattaagtcagcaagaaagccatttccacacgatactcgaaacgggaatgcaggcggtc
gcacaggataacaatgatgatttagagctggtgatttttggcagctcgtcagaatatcaa
tcccttgccaacagcatttttgggatcaataccaacaatggcggcatgtatttagaaggc
tctcccgctggacttaaaaaccaagcgcgttttattgcctatgaggccgagtggcgacaa
cctgattttcatgtgtggaacttacagcatgaatacgtgcattacctcgatggccgctat
aacttgtttggcgacttcagccgcagcgtatccgccaacacaatttggtggattgaagga
ttagcagaatatatttcatatcgagatgccaaccccgctgccatcgccatgggtgaaacc
ggtgagtttatgctctcaaccatctttaaaaacacctatgactctggccaagaccgcatt
taccgttggggttacctcgccgtacggttcatgtttgaaaaccaccgcgatgatgttcgc
cagatcctaaccttcctgcgtaataaccaatatgctgaatatcaagcatttatggattcc
attggcacccgctatgacaacgaatggcgcggctggctcaccagcggtttaagcactacc
aacaatggtattgtcgataaaggcccaagtgatgaacaggctaatgccagtggtcgcgaa
ggcaactgggcaggccccgcgggcaccatcagcaaagattactcgccctgccaagtcagt
aacgaagcataccgctacagtgagtctgccagtctcagtcttgaggtacccatggagtgt
attgatgccaaacaaggccgagccagctttagctttgccaatagtgaccgctcggcccaa
gatatttggatcaaaattggcggtggttggggagatgccgatatttattacgattcaagg
ggatgggcaagtgctgaaaaaaatcagggctatggcatcggcaacggtaattaccaagtg
atcaaagtgagcctaaaccccaatgaactttggcactatatcaccctagaaggggatttt
ggtggtgttgatatgctggtcagtaccagtgagttagttgccgataccgatcccgactta
ggtgatggcgatactggcggtgaagtgcccagcaactgtggtgccgcaaccatcaattac
ggcaagctaaccctcggaaaagatgaatgtatcagcggtggtcgtaatagcttttatttc
tgggtcgatgctgacaacagccaatttagtgtcagcacaaccgggggaacaggcgatgcc
aatatttactttaatgccaatacttgggcaagtgcgagcaatgcccaagccagcagtgta
aatcaaggcaacaaagagtcctttagttttacggcaaaccgtggctggcgatatatcacg
gttgataccgcgagtgaatttagtggcgtgaccttcaaccttaaagccggtggtggtggc
agtagcgttcctaatcaaattgccaatgcctgtgcgactaaatcacccgtgagctatacc
caactcacgccgggtgatgccgtctgcagcgccaatggccgtaatgactattatctttgg
attccagaagggacaagccaactagaagtacgctcggcccacggaactggagatgtcagc
ctttactcgggtcgcagctgggccaatgcccagcaatatgaagccgcctcaacaaacgct
ggcagcactaaggaacaaatcaaggtcaataatcccagtgctggctggtattacattacg
ctccaaagtgaaggccaaagtgcaggtgtggcccttcaggtagatttacgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (45)   

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