KEGG   Shewanella oneidensis: SO_0980
Entry
SO_0980           CDS       T00099                                 
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil747-C5)-methyltransferase RumB
  KO
K03212  23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
Organism
son  Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:son00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:son03009]
    SO_0980 (rumB)
Enzymes [BR:son01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     SO_0980 (rumB)
Ribosome biogenesis [BR:son03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SO_0980 (rumB)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_15 Cons_hypoth95 Methyltransf_25 Methyltransf_12 UPF0020
Other DBs
NCBI-ProteinID: AAN54054
UniProt: Q8EI67
Position
1009602..1010762
AA seq 386 aa
MSTLVQCGYFERGQCQSCRHIKLPMVQQLAAKTQELQQLLAPFVVSTNTQFLPPVVGEDS
GFRNKAKMVVLGAAHAPVLGIVSPNGEAVSLCDCLLYPADMQALLYRLERFVQQAGIPPY
RIDKAKGELKYILLTRSQVRGEYMLRFVLRSPDAIARIERELPALMAEYPQINVVSVNIQ
PIHMAILEGDEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPHVAAKLYQTAREWVGEFA
PKSLWDLFCGVGGFGLHCASKDIPLTGIEIEAEAIACAKMSAQMMGLDNVQFMALDSTDF
AKGDAAATKPDLIIVNPPRRGIGESLCDALSEFAPRAILYSSCNPKTLAKDLVHIRGYQL
TRVQLFDLFPHSDHFEVLAMLVKDSR
NT seq 1161 nt   +upstreamnt  +downstreamnt
gtgagtacattagtgcaatgtgggtattttgaacgaggccaatgccaatcctgtcgccat
attaagctcccgatggtgcagcaattggcggcgaaaacccaagaattgcaacaattgtta
gccccttttgttgtgagcactaatacccaatttttgccacccgtagtgggtgaggacagc
ggctttcgtaacaaggcgaaaatggtggtgcttggcgctgcccatgcgcctgtgctgggg
attgtcagtccaaatggcgaagcggttagtctctgtgactgcttgctgtaccctgcagat
atgcaagcgttgctctatcgcctagagcgttttgtgcagcaagcgggtatcccgccttat
cgcattgataaagccaagggcgagcttaagtatattctgctgacccgaagccaagttcgt
ggtgaatatatgctgcgttttgtgctgcgatcacccgatgccatcgctcgtatcgaacgg
gaattacccgcgctgatggctgaatatccacaaatcaacgtcgtgtcggtaaatattcag
cccattcatatggcgatccttgagggggatgaggaaattttcttaactgaaaatactcgt
ctcgaagagcgctttaacgatgtgcctttgtttattcgtccaaaaagctttttccaaact
aatccacacgttgctgcaaagctgtatcaaaccgcccgtgagtgggttggcgaatttgca
ccaaagtcactgtgggatttattttgtggtgtgggcggctttggcttgcactgcgcctct
aaagatattccgctaacaggcattgaaatcgaggctgaagcgattgcgtgcgctaagatg
tcagcgcaaatgatggggctcgataacgtgcagtttatggcgctcgactctaccgatttt
gccaaaggtgatgcggccgcaaccaagcctgatttaattattgtcaatccgccgcgccgc
gggattggtgagtccctatgtgatgctttaagtgaatttgcccctagggcgattttgtat
tctagttgtaatcctaaaacgctggcgaaggatttagttcatattcgtggctaccagtta
actcgggtgcaactgtttgatctgtttccccactcggatcactttgaagttttagccatg
ttggtaaaagattcgcgttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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