KEGG   Shewanella oneidensis: SO_1085
Entry
SO_1085           CDS       T00099                                 
Name
(GenBank) RNA pseudouridylate synthase family protein
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
son  Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:son00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:son03009]
    SO_1085
Enzymes [BR:son01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     SO_1085
Ribosome biogenesis [BR:son03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    SO_1085
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AFV73522
UniProt: K4PTX7
Position
complement(1124773..1125501)
AA seq 242 aa
MRLAKYLAQCGISSRREACRLIEAGRITLNGKIAKHTDPVLLDAKGRSLDSICLDADPIL
GTEALDYWLLNKAVGTDCRLLEGDKSSLLHLLPPTPRLYPVGRLDKDSRGLLLLTNDGEL
THKLMHPSFAHSKTYHVKLDRPFTDEFIGQMASGVQYKEVRTLPCQVCRLSEDKFEIVLT
QGLNRQIRRMASALGYKVIDLQRIALMTLTLDSLAEGEIRQLTPQEVVTLKASVTTIDYS
SD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgcttagccaagtaccttgcccaatgcggcatcagttcacgccgtgaagcctgccgt
ttgattgaagcagggcgtatcacacttaatggcaagattgctaaacataccgaccccgtc
ctactcgatgcaaaggggcgaagtcttgatagtatttgcttggatgctgaccccatattg
ggcaccgaagcactggattattggctactcaataaagccgtcggcaccgattgccgcttg
ctcgaaggcgataaatccagcttgctccatcttctgccgccaacaccaagactttaccct
gtcggcagattagataaggattccagagggttattactgctcaccaacgatggcgaactc
acccataaactgatgcaccccagctttgcccacagtaaaacctaccatgtaaagctcgat
agaccctttacggatgagttcatcgggcaaatggccagtggcgtacagtacaaagaggtg
cgcactcttccctgccaagtttgtaggctcagtgaagacaaattcgaaatagtacttacc
caaggcttaaatcggcaaattcggcgtatggctagcgcattagggtataaggttatcgac
ttacaacgcatcgcgctaatgacattaacgctagattccttagccgaaggagagatacgc
caacttaccccacaagaagttgtgacgctaaaggcatcagtgacgaccattgactattca
tctgactaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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