KEGG   Shewanella oneidensis: SO_2433Help
Entry
SO_2433           CDS       T00099                                 

Gene name
aspS
Definition
(RefSeq) aspartyl-tRNA synthetase AspS
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
son  Shewanella oneidensis
Pathway
son00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:son00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SO_2433 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:son01007]
    SO_2433 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:son03016]
    SO_2433 (aspS)
   03029 Mitochondrial biogenesis [BR:son03029]
    SO_2433 (aspS)
Enzymes [BR:son01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     SO_2433 (aspS)
Amino acid related enzymes [BR:son01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   SO_2433 (aspS)
Transfer RNA biogenesis [BR:son03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SO_2433 (aspS)
 Prokaryotic type
   Other AARSs
    SO_2433 (aspS)
Mitochondrial biogenesis [BR:son03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SO_2433 (aspS)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID: 1170146
NCBI-ProteinID: NP_718023
UniProt: Q8EEE9
Position
complement(2541567..2543342)
Genome map
AA seq 591 aa AA seqDB search
MRSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVA
STLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKALTIINSSEPLPLSLDNYQNNSE
EQRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MTSEQVMNKTEEMMRGLFLEMLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELVDVADL
LKDVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLNDLT
QGLEGIQSPVLKFLNENIVNEIINRTGAQTGDIILFGADQATVVAESMGALRLKAGEDFN
LLEGQWRPLWVVDFPMFEKINGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYDMVLNG
CELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGLDRIIM
LMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVKTAKTED
NT seq 1776 nt NT seq  +upstreamnt  +downstreamnt
atgcgcagtcattattgtggagacgtcaataagtctcacgttggacaagaagttaccttg
gtaggttgggttaatcgtagccgtgatttgggtggcgttgtctttttagatttaagagac
agagaaggtctggtccaagtggtttatgatccagatttaccagaggtgttcaatgtggct
agcacactgcgcgctgagttttgtgtgcaggtaaaaggtgtggttcgtgcccgtcctgat
agccaagttaacgcgcaaatgaaaactggcgaaattgaagtgttaggtaaagcactgact
attatcaacagttcagagccgttgccgctgagcttggataactatcaaaacaacagtgaa
gagcagcgtttaaaatatcgttatttagatttacgtcgcccagaaatggcgcagcgctta
atgttccgcgcgaaagtgaccagtgcagtgcgtcgtttcctcgactcaaacggtttctta
gatatagaaacgccgatcctgaccaaggcaaccccagaaggtgcccgtgactatttagtg
ccgagtcgtacttacaaaggtcaattttttgccctgccacaatcgccacagctattcaaa
cagctgctgatgatgtcaggttttgatcgttactatcaaatcgtaaagtgcttccgtgac
gaagacttacgtgctgatcgtcagccagaattcacccaaatcgatatcgaaacctcattt
atgacgtctgagcaagtgatgaataagaccgaagaaatgatgcgtggtctgttccttgag
atgctgaacgttgatttaggcgagttcccgcgtatgacctacaacgaagccatgcgtcgt
tttggttcagacaagcccgatttacgtaacccattagagctggtggacgttgccgattta
ctcaaagacgttgaatttgcggtattctcaggtccagccaatgacgaagaaggtcgtgtt
gcggcgctgcgtattcctggcggtgcaagcctgtctcgtaagcaaatcgacgattatact
aagtttgttggcatctacggcgccaagggcttagcgtggatgaagcttaacgatctgact
caaggcttagaaggcattcaatcacctgtgcttaagttcttgaatgagaacattgttaac
gaaatcatcaaccgcactggcgcacaaactggcgatattatcctgtttggtgcagatcag
gcgacagtggttgctgaatcgatgggcgcactgcgtcttaaagcgggtgaagactttaat
ctgcttgaaggtcaatggcgtccactatgggtggttgacttcccgatgtttgagaagatc
aacggtagcttccacgcggttcaccatccatttactgcgccgcgtggcgtgacacctcaa
gagctagaagccaatcctgctaaccgcgtctcagatgcctacgacatggtattaaacggc
tgcgaattaggcggtggttcggtacgtatccacaaccaagaaatgcaatctgcggtattc
cgcattctgggcattaccgatgaagaagcgaaggaaaaattcggcttcttactcgaagcg
ctgcgttatggtacaccgccacatgcaggtttagcctttggtttagaccgcatcatcatg
ttgatgacgggcgcaagctcaatccgtgatgtgatggcgttcccgaaaactaccacagct
gcatgtccgttaaccaatgccccaggttttgctaacccacaacaattagcagaattaggc
attgcagtggtaaaaactgcgaagactgaagactaa

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