KEGG   Shewanella oneidensis: SO_3424
Entry
SO_3424           CDS       T00099                                 
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase ValS
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
son  Shewanella oneidensis
Pathway
son00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:son00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SO_3424 (valS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:son01007]
    SO_3424 (valS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:son03016]
    SO_3424 (valS)
Enzymes [BR:son01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     SO_3424 (valS)
Amino acid related enzymes [BR:son01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   SO_3424 (valS)
Transfer RNA biogenesis [BR:son03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    SO_3424 (valS)
 Prokaryotic type
    SO_3424 (valS)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 Val_tRNA-synt_C tRNA-synt_1g tRNA-synt_1_2 ABC_tran_CTD
Other DBs
NCBI-ProteinID: AAN56421
UniProt: Q8EBS5
Position
3563499..3566375
AA seq 958 aa
MEKTYDPQSIEQTLYQNWEEKGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMD
TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKSRHDLGRDVFMEKVWEWKAQ
SGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQEVFVRLYEDDLIYRGKRLVNWDPKLH
TAISDLEVENKEKQGHMWHLRYPLADGELTADGKDYLEVATTRPETMLGDSAVAVHPDDE
RYQALIGKYILLPIVNRRIPIVADDYVDMAFGTGCVKITPAHDFNDYEVGKRHKLPMFNV
LTLDAAIRSSAEVVNTDGTINTSLDGSLPERYAGLDRFKARDAIVAEFETLGLLEKIAPH
GLKVPYGDRSGVVIEPMLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDI
QDWCISRQLWWGHRIPAWYDTNGKVYVGRTEAEVRAKHDIDDAIALRQDEDVLDTWFSSA
LWTFSTLGWPDNVEDLKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKT
VYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIDLETLVEKRTGNMMQPQLAAKIEKSTRK
EFENGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEGQD
CGPNSPDYQGGEMELSLADRWIIDLFNQTVKTYDEHMASYRFDLAANTLYEFTWNQFCDW
YLELTKPVLQNGTEAQMRGTRHTLVNVLEAMQRLMHPMMPYITETIWQRVKPLTGVQGDT
IMLAPFPAFDAAKVDATAMADLEWVKQVIVAVRNIRAELNIAPSKPLNALLRGVSAQDKA
RIEANQAFFATLARLESMTILGEGETAPMSTTGLIGEMELLIPMAGLVDVAAEMARIDKQ
LEKLTQEIARIEGKLSNEGFVAKAPPAVIDKERAKMADLSRDIDKLTEQKAEFAKLEA
NT seq 2877 nt   +upstreamnt  +downstreamnt
atggaaaaaacatacgatcctcagtccattgagcagactctttaccaaaactgggaagag
aaaggttattttaaaccccacggcgatgcctcacagggcaactattgcatcatgatcccg
ccgcccaacgtgacgggtagcctgcacatgggtcacgccttccaagataccatcatggat
accttgatccgctaccaacgtatgaagggtaaaaataccctgtggcaggtcggtacagat
cacgctggtattgcgacgcaaatgctggttgagcgtaagcttgaagctgaagaaggcaag
agccgccatgatcttggtcgtgatgtctttatggaaaaagtttgggaatggaaagcacaa
tctggcggcaccatcactaagcagctacgtcgtatgggcgcatcggttgattgggatcgc
gagcgttttaccatggatgaaggtttgtcaaaagccgttcaagaagtgtttgtccgtctc
tacgaagacgatttgatttaccgtggaaaacgcttagtaaactgggatcctaaactgcat
accgcaatttctgatctcgaagtggaaaacaaagagaaacaaggccatatgtggcatctg
cgttatccactggccgacggtgaactgaccgcggatggtaaagattatttagaagttgcc
accactcgtccggaaactatgctgggcgatagcgcggtggcggttcaccctgatgatgaa
cgttatcaagcattgattggcaaatatattctgctgcctatcgtgaatcgtcgcatccca
atcgttgccgatgattatgtggacatggcttttggtacaggttgtgtgaaaatcactcct
gcccacgactttaatgactatgaagttggtaagcgccacaagctgcccatgttcaacgtg
ttaaccttagatgcagccattcgctcatcagcagaagtggttaacactgatggcaccatc
aacaccagcttagatggcagcctacccgagcgctacgcaggtttagatcgtttcaaagcc
cgtgatgccatcgttgccgaatttgaaaccttaggcctgctcgagaaaatcgcgccgcac
ggcttaaaagtgccctatggtgaccgttctggtgtagttatcgagccaatgctgaccgac
caatggtacgtagcagttgcgcctatggccaaaaccgcaatcgaagccgttgaaaatggc
gatatcaagttcgtgccacagcagtacgaaaacatgtacttctcttggatgcgcgacatt
caagattggtgtatttctcgccaattatggtgggggcaccgcatcccagcttggtacgac
acaaacggtaaggtctatgtaggccgcaccgaagcagaagtgcgtgctaagcacgatatc
gatgatgcaatcgccctacgccaagatgaagatgtattggatacttggttcagctcagcg
ctgtggacattctccaccttaggctggcctgacaatgttgaagatttaaaaaccttccat
ccaaccgacgtgttggtaactggttttgacatcatcttcttctgggttgcccgtatgatc
atgatgaccatgcacttcatcaaagatgaagatggtaaaccacaagtaccattcaaaacc
gtctacgtgacgggtcttatccgcgatgaagcgggcaataagatgtcaaaatctaagggc
aatgtacttgacccattagatatgatcgacggtatcgatcttgaaaccctcgttgaaaaa
cgtactggcaacatgatgcagcctcagctagccgccaagatcgaaaagagcacccgtaaa
gaattcgagaacggtatcgaagctcacggtactgatgccctgcgctttactctggcggca
atggcctcaacgggccgtgatatcaattgggacatgaaacgtttagacggttaccgcagc
ttctgtaacaagttatggaacgcgtcacgctacgtgctgatgaataccgaaggccaagat
tgcggcccgaactctccggactaccaaggcggcgagatggaactgtcactggcggatcgc
tggatcatcgatttattcaaccaaaccgtaaaaacctatgacgagcacatggcaagctac
cgcttcgatctcgcagctaacacgttgtacgagttcacttggaatcagttctgcgattgg
tacttagagttaactaagcctgtcctgcaaaacggcaccgaagcgcaaatgcgtggtacg
cgtcatacgctggtcaatgttttagaagcgatgcaacgtctgatgcatccaatgatgccg
tacatcactgaaaccatctggcaacgcgttaaaccgctgactggcgtccaaggtgacacc
attatgctggcgccattccctgcatttgatgcagctaaagtggatgcgaccgcgatggcc
gacctcgagtgggttaagcaagtgattgttgctgtacgtaatatccgtgcagagctcaat
attgcgccttctaagccattaaacgccttattacgcggcgtgagtgctcaagataaagcc
cgcattgaagctaaccaagccttcttcgcgaccttggcacgcttagaaagtatgacgatt
ctaggtgaaggtgaaacagcaccgatgtcaactacgggtttgattggtgagatggaatta
ttaattccgatggcaggtctggttgatgtggctgccgaaatggcccgtatcgacaaacaa
cttgaaaaactaacccaagaaattgcccgtatcgaaggtaaattatccaatgaaggtttc
gttgcaaaagcgccgccagccgttattgataaagagcgcgccaaaatggccgatctcagc
cgcgatattgacaagttaacagagcaaaaagcggaatttgctaagttagaagcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

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