KEGG   Shewanella oneidensis: SO_A0013
Entry
SO_A0013          CDS       T00099                                 
Symbol
umuD
Name
(GenBank) DNA polymerase V subunit UmuD
  KO
K03503  DNA polymerase V [EC:3.4.21.-]
Organism
son  Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:son00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:son01002]
    SO_A0013 (umuD)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:son03400]
    SO_A0013 (umuD)
Peptidases and inhibitors [BR:son01002]
 Serine peptidases
  Family S24: LexA family
   SO_A0013 (umuD)
DNA repair and recombination proteins [BR:son03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    SO_A0013 (umuD)
SSDB
Motif
Pfam: Peptidase_S24
Other DBs
NCBI-ProteinID: AAN52952
UniProt: Q8E896
Position
megaplasmid:complement(11335..11739)
AA seq 134 aa
MRVIPIPAQAGITGFESPAAEYTQLGLSLDELLIIHPSASFLCVAQGDSMQGVGIYDGDV
LIVDRHETARNGDVIVANFNGLFVCKIIDTQRRLLLSCNEQFQPVTVQEFDDFSIEGVVI
RSIRCHRPSSLLCA
NT seq 405 nt   +upstreamnt  +downstreamnt
atgcgtgttattcctatcccagctcaagcgggtattaccggctttgaaagccccgcagct
gaatatactcagcttgggcttagccttgatgaattgctgatcatccatcctagtgccagt
tttttatgcgtggcgcagggagactcgatgcaaggtgtagggatttatgatggtgatgtc
ttaatcgttgaccgccatgagaccgcccgcaatggtgatgtgatagtcgctaattttaac
ggcctgtttgtctgtaagatcatcgacacccaaaggcgtttgctgttgtcatgcaatgaa
caatttcagccggtcacagtacaagaattcgatgattttagtattgaaggcgtggttatc
cgctcgattcgttgtcaccgccctagttcgttactgtgtgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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