KEGG   Schaalia odontolytica: FBF35_05290
Entry
FBF35_05290       CDS       T05977                                 
Name
(GenBank) primosomal protein N
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
soo  Schaalia odontolytica
Pathway
soo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:soo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FBF35_05290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:soo03400]
    FBF35_05290
Enzymes [BR:soo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FBF35_05290
DNA repair and recombination proteins [BR:soo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FBF35_05290
SSDB
Motif
Pfam: PriA_3primeBD
Other DBs
NCBI-ProteinID: QCT35479
Position
1197379..1199361
AA seq 660 aa
MTSQQGMLDGFDPPRSRAAEIARVLVDVDLPHMDRPLDYVVPDKFIDEAEVGRAVRVRFS
GTRVDGWIVERTRRDVLDDAAQIESVSSAIPVLTPALYEAARRIAHRFLATTSQVLSLAI
PPRHARGEKTVVQAHASAWPSVDAPTVSEGWASYRAGDALLHRLAAGESPRAVVTALRPR
MRACLSDAIAATVSSGRSAIIVAATGEDAARYARALEEDLGVPVAVTGGEVAPEERYRIH
VAATLGRLPIVVGTRSAAWVPCAKLGLIVICNDGDDRLRERRFPRCDVLDIAVQRCAVEG
AGLLVASFARSVKAQALVRSGWAVSLDPVPGALRDATPRVHLHGATEAEREGASGHMRIP
PAALRMIRQGLREGLVLIQVAASGYWPTVVCRRCSERARCRHCSGPLAVNSGGEVTCSWC
ARATGTWRCPHCSGTELRAARVGSTRTAEEIARNLPDASVLESSAAHRITRQLHSRPTVV
VATPGAEPDVDGGYAAAIILDAHALAGRAELWAPEEAARRWLNALSLVRPGHPGLVVGTI
PDALGQALVRWAPTDYADRLLDEREALGFFPATTMVALDGPAAQVRQVAEQVIRDGGAEL
VGTVVRPATREGEENEVRTLVRSPLAGATSMLAVLTDIRRSRSARKVPLVKMSVNPPELF
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgacttcccaacagggcatgcttgacggtttcgatccgccgcggtctcgggccgcggag
atcgcacgcgtgctcgttgacgtcgatctgccgcacatggatcggccgctcgattacgtc
gttccagacaagttcatcgacgaggccgaggttggccgcgcagttcgcgtgcggttttcc
ggcacgcgcgtggacggctggatcgttgagcgtacacgtcgcgatgtgcttgacgatgcc
gcgcagatcgaatcggtatcgtctgcgatcccggtgttgacgcccgcactgtatgaggcc
gcgcgtcgcatcgcacatcgctttcttgctacgacgtcgcaggtcctgtcgctcgctatc
cctccgcgacatgcacgcggcgaaaagactgtcgtacaggcacacgcgtcggcgtggcca
tccgttgacgctccgactgtttctgaaggctgggcatcctatcgtgctggcgacgcgtta
cttcaccgccttgcagccggagagtctccgcgtgcagtcgtgaccgccctgcgtccccgg
atgcgcgcgtgtctgtcggatgccatcgctgccactgtttcgtcggggcgcagcgccatc
atcgttgctgccaccggagaggacgccgcgcgctacgcacgcgcacttgaggaggacctc
ggggtgcccgtcgctgtgacgggcggtgaggtggcgcccgaggagcgttaccgtatccac
gtagccgcgacactcgggcgtcttccgattgtggtcggcacgcggtcggccgcgtgggtt
ccgtgtgcgaagctgggcctcattgtcatctgcaacgacggcgacgatcgactgcgagag
cgcaggttccctcgctgcgacgttcttgatattgccgtgcagcggtgcgcggtggagggc
gcagggctccttgttgcttccttcgcacgctccgtgaaggcacaggctctcgtccgttct
ggatgggcggtcagtctcgatccggtgcccggcgcgctgcgcgacgcgactccacgcgtg
catctgcacggcgcgacggaagcagaacgtgagggcgccagcggccacatgcgcattccc
ccggcagcgttgcgcatgattcgccagggcctgcgcgaaggcctcgttctcatccaggtc
gcagcgtccggctattggcccacggtcgtgtgccgccgttgcagcgagcgagcgcgctgc
cgccattgctcgggtcctctcgcagtcaatagcgggggagaggtcacctgttcgtggtgc
gcccgcgccactggtacttggcggtgcccacactgctcgggaacagagctccgcgcagct
cgcgtgggatcgacgcgcaccgccgaagagatcgcgcgcaacctgccggacgcatcggtc
ctcgagtcatcggctgcacacagaatcacccgccaactgcactcacgccccacggtcgtc
gttgctacgccgggagctgagccagacgtggacggtggctacgccgccgccatcatcctc
gacgcgcacgctctggctgggcgagccgaactgtgggccccggaggaggctgcccggcgg
tggctcaacgcgctgtcccttgtccgcccaggccaccccggcctcgtcgtcgggacgatt
cccgatgcgttggggcaggcactcgtgcgctgggcccccaccgactacgccgatcgtctt
ctcgatgagcgcgaggccctgggcttctttccggccacgacgatggttgccctcgatggg
ccagcggctcaggtccgtcaggtcgccgaacaggtgattcgcgatggaggagctgagctg
gtcggcaccgtcgtgcgcccggcgacgcgcgagggcgaggaaaacgaagtacgcacactg
gtgcgcagcccgttggccggggcgacgtcgatgctcgcggtgcttaccgatattcgacgc
tcacgcagtgcgcgcaaggttccactcgtcaaaatgagcgtgaacccacccgagctcttc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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