KEGG   Streptococcus oralis: SOR_1482
Entry
SOR_1482          CDS       T01476                                 
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sor  Streptococcus oralis
Pathway
sor03410  Base excision repair
sor03430  Mismatch repair
sor03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SOR_1482 (recJ)
   03430 Mismatch repair
    SOR_1482 (recJ)
   03440 Homologous recombination
    SOR_1482 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sor03400]
    SOR_1482 (recJ)
DNA repair and recombination proteins [BR:sor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     SOR_1482 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SOR_1482 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SOR_1482 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 PGM_PMM_II YjeF_N AlaDh_PNT_C
Other DBs
NCBI-ProteinID: CBZ01134
UniProt: F2QER5
Position
complement(1431249..1433522)
AA seq 757 aa
MPKSCYNETIEFLERVDVFLITPTYEWQFAPQVEDADFTKIAKKAGLGPEVARLLFERGI
QNEESLKKFLEPSLEDLHDPYLLHDMDKAVERIRQAIEEGENILIYGDYDADGMTSASIV
KESLEQLGAECRVYLPNRFTDGYGPNASVYKYFIEQEGISLVVTVDNGVAGHEAIELAQS
MGVDVIVTDHHSMPETLPDAYAIVHPEHPDADYPFKQLAGCGVAFKLACALLEEVQVELL
DLVAIGTIADMVSLTDENRILVQYGLEMLGHTQRIGLQEMLDMAGIAANEVTEETIGFQL
APRLNALGRLDDPNPAIDLLTGFDDEEAHEIALMIHQKNEERKEIVQSIYEEAKTMVDPE
KKVQVLAKEGWNPGVLGIVAGRLLEELGQTVIVLNIEEGRAKGSARSVEAVDIFEALDPH
RDLFIAFGGHAGAAGMTLEVEKLSDLSQVLEDYVREKGADAGGKNKLNLDEELDLETLSL
ETVKSFERLAPFGMDNQKPVFYIKDFHVESARTMGAGNAHLKLKISKGEASFEVVAFGQG
RWATEFSQTKNLELAVTLSVNQWNGQTALQLMMVDARVEGVQLFNIRGKNAVLPEGVPVL
DFSGELPDLANSEAVVVKTIPEDITLLKTIFQEQDFSAVYFKNDIDKAYYLTGYGTREQF
AKLYKTIYQFPEFDIRYKLKDLAAYLNIQQILLVKMIQVFEELGFVTIKDGVMTVNKETP
KREIAESQIYQNLKQTVKDQEMMALGTVQEMYDFLKG
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgcctaaatcatgttataatgaaacgatagaattcttagaaagagtggatgtttttttg
ataactcctacttatgaatggcagtttgccccacaggttgaagatgcggattttacaaag
atagccaagaaggctggactgggccctgaggtggctcggttattatttgaaagagggatt
cagaatgaagaaagtctaaagaagtttttagaaccttctttagaggacttgcatgaccct
tatctgctccatgatatggataaggcagtagaacggattcgtcaggccattgaagaaggg
gaaaacattctcatctatggggactacgatgcggatggcatgacttcagcgtcgattgtg
aaggaaagtttggaacagctgggcgccgagtgccgtgtttatctgccaaatcgctttacc
gatggctacggtcctaatgccagtgtctataaatactttatcgagcaagagggaatttcc
ctggttgtgacagtggataatggggttgcagggcacgaagccattgaattggcccagtct
atgggagtggatgtcattgtgaccgaccaccattccatgccggaaacccttcctgatgcc
tatgcgattgttcaccctgagcatccggatgcggactatccttttaaacagttggctggt
tgcggagtggctttcaagctggcttgcgctcttttagaagaagtacaagtggagttgctt
gatttggttgccatcggaaccattgccgatatggtgagtctgacggatgaaaatcgtatc
ttggttcaatatggtctggaaatgttgggacatacccagcgcattggactacaagaaatg
ctggacatggctgggattgctgctaatgaagtaacagaagaaacgattggtttccagctt
gcaccgcgtttgaatgctttggggcgtttggatgatcccaatcctgccattgatttgctg
actggatttgatgatgaggaagcgcatgagattgccctcatgattcaccagaaaaacgaa
gagcgcaaggaaatcgttcagtcaatctacgaagaagctaagaccatggtggatcctgag
aagaaggtccaggttttggccaaggaaggctggaatcctggcgttctgggtatcgttgct
ggtcgtttgttggaagaactagggcagacagtcatcgttcttaatatagaagaaggtcgc
gccaagggtagtgctcgtagtgtggaagcggtcgatatttttgaagctctggatccccat
cgagacctctttatcgcctttggcggccatgctggtgcagctggaatgacgctggaagtt
gagaaactttcagatttatctcaggttttagaagactatgtccgtgaaaaaggtgcagat
gctggtggcaagaataagttaaatctagatgaagagttggatttggagactcttagttta
gaaacggttaaaagctttgaacgcttggcaccctttgggatggataatcagaaacctgtc
ttttatatcaaggattttcatgtcgaaagtgccagaaccatgggagcaggcaatgcccac
ctcaaactaaaaatttccaagggtgaggcgagttttgaagtggtggcctttggacaaggt
agatgggcaacagaattttctcaaaccaagaatctagaattggcagtcaccctgtctgtc
aatcaatggaatggccaaactgccctccagttgatgatggtggatgcgcgtgtggaaggt
gttcaactctttaacattcgtgggaagaatgcagtcttgccagaaggggttccagtcttg
gatttctctggagaattgccggatttggcgaatagtgaagcggttgttgtgaaaactatt
cccgaggatattaccttgcttaagaccatttttcaggaacaggatttctctgctgtctat
ttcaaaaatgacatcgataaggcctactatctgacaggttatgggactagggaacagttt
gcaaaattgtacaagaccatttaccagttcccagagtttgatattcgctacaagctgaaa
gatttggcggcttatctcaatatccaacaaatcttgctggtcaagatgatccaagtattt
gaagagctgggctttgtgacaatcaaagatggtgtcatgacagtcaataaagaaacgccg
aaaagggaaattgctgaaagtcagatttaccaaaatctcaaacagaccgttaaagaccaa
gaaatgatggcactggggacagtgcaagaaatgtatgactttttgaaaggataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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