KEGG   Solanum tuberosum (potato): 102584740
Entry
102584740         CDS       T02981                                 
Name
(RefSeq) ATP-dependent RNA helicase DHX36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102584740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102584740
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     102584740
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C HA2_N DEAD AAA_22 nSTAND3 NACHT SR-25 AAA_19 T2SSE
Other DBs
NCBI-GeneID: 102584740
NCBI-ProteinID: XP_006348571
Position
Un
AA seq 975 aa
GGGGRGGGGRGGGGRGGEQRWWDPVWRAERLRQQAAEMEVMNENEWWGKMEQFKRGGEQE
MVIRRNFSRDDQQKLSDMAYQLELYFHAYNKGKALVASKVPLPSYRADLDERHGSTQKEI
RMSTEIEERVGNLLSSSQDTVSAGTSSSTSGNSAKLSSKAVETAKPKLTIEDDTATKTLN
VELKQKQEKTRESEKVKAMISFREKLPAFKVKSEFMEAVANNQVLVVSGETGCGKTTQLP
QFILEEEISSLRGVDCNIICTQPRRISAISVAARICSERGESLGDTVGYQIRLEAKRSAQ
TRLLFCTTGVLLRRLVQDPDLTGVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLIL
MSATINAELFSQYFRDAPTIHIPGLTYPVEELFLEDVLEKTRYLIKSEADNFQGNSRRRM
RQQDSKRDPLTDLFEDVDISSHYKGYSMTTRQSLEAWSGSQLDLGLVEASIEYICRCEGE
GAILVFLAGWDEISKLLDKIKANNFLGDTRKFLVLPLHGSMPTVNQREIFDRPPANTRKI
VLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ
PGVCYRLYPKLIHDAMAQYQLPEILRTPLQELCLHIKSLQFGAIESFLAKALQPPDALSV
HNAIELLKTIGALDDTEELTPLGRHLCTLPLDPNIGKMLLMGSIFQCLNPALTIAAALAH
RDPFVLPLNRKEEADAAKRSFAGDSCSDHIALLKAFEGWKDAKRYGKERTFCWENFLSPV
TLQMMEDMRNQFVDLLSDIGFVDKSRGAKAYNEYSNDLEMVCAILCAGLYPNVVQCKRRG
KRTAFYTKEVGKVDIHPASVNASVHLFPLPYLVYSEKVKTSSIYIRDSTNISDYSLLMFG
GNLTPSKSGDGIEMLGGYLHFSASKSVLDLIKKLRVELDKILKRKIEEPHFDVSVEGKGV
VAAVVELLHSQDIRY
NT seq 2928 nt   +upstreamnt  +downstreamnt
ggcggtggaggccgtggtggcggtggtcgtggaggaggaggacgtggtggtgaacagaga
tggtgggatcctgtatggcgtgctgaacgacttaggcaacaggcagctgagatggaggtg
atgaatgagaatgagtggtgggggaagatggagcagtttaagagaggaggcgagcaggaa
atggttataaggcggaattttagtagggatgaccaacagaagttgtctgatatggcgtat
caattagaactttacttccatgcttataacaagggaaaggcacttgttgcaagcaaagtc
ccattgcctagctatcgtgctgatcttgatgagcgtcatggatctacacagaaagagatt
aggatgtctacagagattgaggaaagagtcggaaatctattgagtagttcacaggacaca
gtatctgctgggacttcctcttcaacatctggtaattctgccaaattatcatccaaagct
gtagaaacagccaaacccaagttgactatagaggatgatactgccaccaaaacacttaat
gtggaacttaaacagaaacaggaaaagacgagggaaagtgaaaaagtcaaggcaatgatc
tcattcagagaaaaacttccagcatttaaagtgaaatctgaatttatggaagctgttgca
aataatcaggtcttggtagtttctggagagactggttgtggaaagacaacccagctccct
caattcattctagaagaggagatatcatcccttcgtggtgttgattgtaacattatatgc
acacagcctcgccgtatatctgcaatatcagttgctgctcgaatatgctctgaaagagga
gagagtcttggtgatactgttggctaccagattcggctggaagcaaagcgctctgctcaa
acacggttgctattttgcacaactggagtgttactgcggcggctggttcaggaccctgat
ttgactggtgttagccatctgcttgttgatgaaatccatgaaagaggcatgaatgaagac
ttcctcttgataattttacgtgacctgcttcctcgacgacctgatttgcgtctcattctg
atgagtgctactattaacgctgagttattctcccaatacttcagagatgcacccacgatt
catataccgggtttgacatatccagtggaagagctgtttcttgaagacgtgttggagaag
actcgttaccttataaaatccgaagcagacaatttccaaggaaactcaaggagaaggatg
aggcaacaagattctaaaagagatccgctgactgatctttttgaggatgtggacattagt
tcacattacaaaggctacagcatgactacaagacaatctctggaagcatggtctggttca
cagcttgatttgggtcttgtggaagcatcaattgaatatatttgtcgctgtgaaggtgaa
ggtgcaattcttgtgttcctagctggttgggatgagatttctaagctacttgataaaatt
aaggctaacaacttccttggagacaccaggaagtttttagtcctccctcttcacggttca
atgccaacagtaaatcaacgagaaatatttgatcgtccacctgctaacacgaggaaaatt
gtgcttgcaaccaacatagctgagagcagtataactatagatgatgtcgtgtatgtcata
gactgtgggaaggcgaaagagactagctatgatgcactgaacaagctagcttgtttatta
ccatcatggatttcaaaggcctcagcacatcagaggcgcggtcgtgcgggccgtgtacaa
cctggagtttgttataggttgtatccgaaactaatacatgatgctatggcacaatatcaa
ctacctgagattcttcgaacaccattacaagagctttgtctccatattaagagtttgcag
tttggcgccattgaatcctttttggccaaggcacttcaacctccggatgctctctctgtc
cacaatgctattgaacttctcaaaactattggagctctggatgatacagaagaacttact
ccacttggacgccatctttgcactctaccgctggatccaaatattggaaagatgcttctg
atggggtccatcttccaatgtctgaaccctgcactgactattgctgctgctctggcacac
cgtgatccatttgtccttccattaaacaggaaagaggaagcagatgctgctaaaagatcc
tttgctggtgattcttgcagtgatcatattgcacttctgaaagcatttgaaggatggaaa
gatgctaaacgttatggaaaagaaagaaccttctgttgggaaaatttcttatctcctgta
accttgcagatgatggaagacatgagaaatcagtttgttgacctactgtcagatattggt
tttgtggataaatcacgaggagccaaggcatacaatgaatatagcaatgatttagagatg
gtatgtgccatcctttgtgcgggactctacccaaatgtcgtgcagtgtaaaagaagagga
aagcgtacagcattttacacgaaggaagttggaaaagtagacatccacccagcatctgtt
aacgctagtgttcatcttttccctcttccctacttagtttacagtgagaaagtcaagacc
tcaagcatttatatcagagattcaacgaacatatccgattattctctccttatgtttggg
ggtaatctcactccaagcaaaagtggagacggcattgaaatgcttggaggctatcttcac
ttttccgcgtcaaaaagtgtgttggatttaataaagaaactgcgagtggaactggataaa
atattaaaaaggaaaatcgaagagccccactttgacgtctcagtcgagggaaagggtgta
gttgctgctgtggttgagttacttcatagtcaagacatacggtactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

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