KEGG   Solanum tuberosum (potato): 102586389
Entry
102586389         CDS       T02981                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03010  Ribosome
sot04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    102586389
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102586389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sot03011]
    102586389
   04121 Ubiquitin system [BR:sot04121]
    102586389
Ribosome [BR:sot03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    102586389
  Archaea
    102586389
Ubiquitin system [BR:sot04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   102586389
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 zf-C4pol Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Plexin_RBD Dsc3_N DUF2604 OTU1_UBXL
Other DBs
NCBI-GeneID: 102586389
NCBI-ProteinID: XP_006350492
UniProt: M1AWG5
Position
Un
AA seq 128 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagaccataacccttgaggttgaatccagc
gataccatcgacaatgtcaaagccaagattcaggacaaggaaggtattccaccggaccag
cagcgactgatctttgctggtaaacagcttgaagatgggcgtacactggcggattataat
atccaaaaagaatcaactctgcatcttgtcctgaggctccgaggtgggatcattgaaccg
tctcttatggccttggccaggaaatacaaccaagagaagatgatttgccgcaagtgctat
gcccgtttgcatccacgtgctgtgaactgcaggaagaagaaatgtggtcacagcaaccag
ttgaggccaaagaagaagatcaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

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