KEGG   Solanum tuberosum (potato): 102588422
Entry
102588422         CDS       T02981                                 
Name
(RefSeq) protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03250  Viral life cycle - HIV-1
sot04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102588422
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102588422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sot04131]
    102588422
   03400 DNA repair and recombination proteins [BR:sot03400]
    102588422
Membrane trafficking [BR:sot04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    102588422
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    102588422
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_5 AAA_16 RuvB_N AAA_14 TIP49 AAA_22 DUF815 AAA_2 AAA_17 AAA_33 RNA_helicase AAA_25 IstB_IS21 AAA_24 AAA_18 NACHT Parvo_NS1 Mg_chelatase nSTAND3 AAA_7 ResIII AAA_28 USP8_dimer Torsin PhoH AAA_30 bpMoxR
Other DBs
NCBI-GeneID: 102588422
NCBI-ProteinID: XP_015170766
UniProt: M1BPW6
Position
Un
AA seq 435 aa
MYSNFKEQAVAYVKQAVEEDNAGNYAKAFSLYMNALEYFKTHLKYEKNPKIKEAITQKFV
EYLRRAEEIRSVLDEGGGGPTSNGDAAVASRAKSKPKNGGGGGEGDDSENVKLRAGLNSA
IVREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYL
AKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFQMARESSPSIVFIDEIDSLCGQRG
EGSESEASRRIKTELLVQMQGVGHDDDKKVLVLAATNTPYSLDQAIRRRFDKRIYIPLPD
LKARQHMFKVHLGDTPHNLTESDFEQLARKTEGFSGSDISVCVNEVLFEPVRKTQDAEFF
IKTSDGLWVPCGPRQPGAIQTNMQELAAKGLASKITPPPISIRDFDRVLWKQKPTVSKAD
LEVHERFTKEFGEEG
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgtatagcaatttcaaggagcaggcagtagcttatgtgaagcaagcagttgaggaagat
aatgctggaaattatgcgaaggctttctctctatatatgaatgctttggagtattttaaa
actcatttgaaatatgagaagaatcccaagattaaggaagcaattacccagaagtttgtg
gagtatttgaggagggctgaggagattcgttctgttctagatgagggaggtggtgggccg
acgtccaatggagatgctgctgttgcgtcgcgcgcaaagtcaaagccaaagaatggagga
ggaggaggagagggtgatgattcagagaatgtaaagttaagagctgggcttaattccgct
attgtaagggaaaaacctaatgtgaagtggaatgatgtagcagggcttgagagtgccaag
caggcattgcaagaggctgttatcctgccggttaagtttcctcagtttttcactggcaag
cgtcgaccgtggagagcctttctgttgtatggtccacctggaacaggaaagtcataccta
gcaaaagctgttgctacagaagcagattcaacctttttcagtgtttcttcatcagacctt
gtttcaaagtggatgggtgaaagtgaaaaacttgtgtcaaatctattccaaatggcccga
gaaagttctccttcaatagtatttatagacgaaattgactccctgtgtggccaaagaggt
gagggtagtgaaagtgaagcatcgagacgtatcaaaactgagcttcttgtacaaatgcag
ggtgtagggcacgatgacgacaaaaaagttctggttcttgcagcgacaaacactccctac
tcattagaccaggctattagacggagatttgacaaaagaatatacattcccctaccagat
ttgaaggcaaggcagcacatgttcaaggtacatttaggagatacccctcacaacttgaca
gaaagtgattttgagcaactagctcggaaaacagaaggtttttcaggttcagacatttct
gtgtgtgtaaatgaagtcttgtttgaacctgtacgtaaaactcaagacgctgagtttttc
attaagactagtgatgggttgtgggtgccttgtggacctagacaaccaggtgctattcag
actaatatgcaggagcttgcagcaaaaggccttgcttcaaagattacaccaccaccaatc
agcataagggattttgacagagtgctatggaaacagaagccaacagtaagcaaagcagat
cttgaggtgcatgagagattcacgaaggagttcggtgaggaaggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (44)   

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