KEGG   Solanum tuberosum (potato): 102589991
Entry
102589991         CDS       T02981                                 
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1-like
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    102589991
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sot04121]
    102589991
   03036 Chromosome and associated proteins [BR:sot03036]
    102589991
Ubiquitin system [BR:sot04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     102589991
Chromosome and associated proteins [BR:sot03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     102589991
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 102589991
NCBI-ProteinID: XP_006347519
UniProt: M0ZIL8
Position
Un
AA seq 342 aa
MENSSQESHLRSENSVTYDSSYPIYAMAFSSFTSSLPSRRRRLAVGSFIEEFNNRVDILS
FDEDTLTLKPVPNLSFEHPYPPTKLMFHPNPSASLKTNDILASSGDYLRLWDVRETSIEP
LFTLSNNKTSEYCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVEKGVVETQLIAHDKEVY
DIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPKPDTPLLRLAWNKQDLRYMATIL
MDNNKIVILDIRSPAMPVAELERHQASVNAIAWAPQSCRHICSAGDDGQALIWELPTVAG
PNGIDPMSMYSAGAEINQIQWSAAQRDWIAIAFSNKLQLLKV
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggagaattcaagtcaagaatcgcatctccggtctgaaaattccgttacatatgactcc
tcctatcctatctacgctatggctttttcatccttcacttcttccctccctagccgccgc
cgtcgacttgccgtcgggagctttatcgaagagttcaacaatcgtgtcgatattctgtcc
ttcgatgaagataccctaacccttaagcctgttcccaatctctcttttgaacacccttat
ccgcctacgaagctcatgttccatcctaatccttctgcttctctcaagactaatgatatt
cttgcttcttctggtgattacctccgtctatgggatgttcgtgaaacttctattgaaccc
cttttcactctcagtaacaataaaactagtgaatattgtgcccctttgacgtcttttgat
tggaatgaggtggagccgagaagaattggtacttctagtatagacactacttgtaccatc
tgggatgttgagaaaggggttgtggaaacccaactgatagctcatgacaaagaggtttac
gatatagcttggggtgaagctggggtttttgcttcggtttctgctgatgggtcagttagg
atttttgatttgagggataaggaacattcgacaattatttatgagagtccaaaaccggac
actccgttgttgaggttggcttggaacaagcaagatttgagatacatggctaccatattg
atggataacaataagattgtgattttagatattaggtctccagcaatgcccgtggcagag
ttggaaaggcatcaggcgagtgtgaatgctattgcttgggctccacagagttgtaggcat
atttgttctgctggggatgatgggcaggcgctcatttgggagttgccaactgttgcaggg
cctaatgggattgatcctatgtcaatgtactctgctggagctgaaattaatcaaattcag
tggtctgctgcacaacgtgattggattgccattgcgttttctaacaagttgcagctgctt
aaagtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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