KEGG   Solanum tuberosum (potato): 102602628
Entry
102602628         CDS       T02981                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sot04131]
    102602628
   04121 Ubiquitin system [BR:sot04121]
    102602628
Enzymes [BR:sot01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102602628
Membrane trafficking [BR:sot04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    102602628
Ubiquitin system [BR:sot04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102602628
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 zf-RING-like zf-RING_16 zf-RING_5
Other DBs
NCBI-GeneID: 102602628
NCBI-ProteinID: XP_006355109
UniProt: M1BKM2
Position
Un
AA seq 207 aa
MASESESVSSLMENLMNSRNIDLSLFLPFILSITNNSISSNPDEETDESTTQSEFSDRII
LVNPLTQNMIVMETRSSTTLDSFLNELMSKEGQPPASKASIDALSTVEICEEGEKGECSI
CLDDWVIGGVVKEMPCKHRFHGDCVEKWLKIHGSCPICRYKMPEENGDSKNRGRRREIWM
SFSSSENHNNQTVSANFSSENDHASEA
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcttcagaatcagaatcggtatcatcgttgatggagaatttgatgaattccagaaac
atagacctttctttgtttttacctttcattttatccatcacgaacaattcaatttcatca
aacccagatgaagaaacagatgaatcaacaacccaatctgagttttccgatcggatcatc
ctcgttaacccgttaacccaaaatatgatagtaatggaaacccgttcatctactacttta
gattcatttctgaacgaattgatgagcaaagaaggtcaaccaccagcttccaaagcatca
attgatgcactttcaactgttgagatttgcgaagaaggagaaaaaggggagtgctctata
tgtttggatgattgggtaattggtggggtagtgaaagaaatgccttgtaagcatagattt
catggagattgtgttgaaaaatggttgaagattcatgggtcgtgtccgatttgtaggtat
aaaatgcccgaagaaaatggtgattcgaaaaatcgaggaagaaggagagagatttggatg
agtttttcaagttcagaaaatcataataatcaaacagtttcagctaattttagttctgaa
aatgatcatgcatcagaagcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system