KEGG   Solanum tuberosum (potato): 102604481
Entry
102604481         CDS       T02981                                 
Symbol
PPS7
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102604481 (PPS7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sot03021]
    102604481 (PPS7)
   03036 Chromosome and associated proteins [BR:sot03036]
    102604481 (PPS7)
Transcription machinery [BR:sot03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102604481 (PPS7)
   Coactivators
    SAGA/TFTC/STAGA complex
     102604481 (PPS7)
Chromosome and associated proteins [BR:sot03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     102604481 (PPS7)
    STAGA complex
     102604481 (PPS7)
    TFTC complex
     102604481 (PPS7)
    SAGA complex
     102604481 (PPS7)
    SLIK complex
     102604481 (PPS7)
SSDB
Motif
Pfam: TFIID_20kDa Histone CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 102604481
NCBI-ProteinID: NP_001275310
UniProt: Q3LHL0
Position
Un
AA seq 638 aa
MAEIPSSSPKLTQPSNPIMDTTNQVSAAGAASSATSSNPGITMTSPSNNNSIAQSPSIDL
PQIPLTQSQQQQQQHQIQMQQPQQMQQQQQQLTQSQQQQQMQLQQQQNNSSNLNGSNSNL
MSASNFQMQQNLQRSPSMARMSQLQMQQQQQQFGLMRQQSGGLYGQMNFGVGGTSLQQQQ
QQQLQQQQQQLQQQFQQQQQQQQQQNQQQQQIGGQMGSGNLARAALMGQTGHLPMLSGQA
AVAAAAVAQFNLQSQFLNSPRQKAGLMQGNQFHTGNSHGQSLQAMGMMGSLNMSSQLRAN
GALAYAQRVNQSQLRQQQLSQQNSLTTTQKISAQSLPRTSFANSQLPGLTQNGQSAIMQN
NSSQQQWLKPMPAISTPNSPSFRLQQQRQQMLLQHQNSMGLNPQQLSQIVQQQQQIGHPQ
MHQQQQQQQQQQQLSHQQQSSPRMAAPAGQKSLSLTGSQPDATGSGTTTPGGSSSQGTEA
SNQLLGKRKIQDLVSQVDAQGKLDPEVEDLLLEIADDFIDSVTTFACNLAKHRKSSTLES
KDVLLHLEKNWHLTIPGFSSEERKHYPENSSSDLHKKRLDVIRTLMETSQTETSTNSSAK
ETVRPGAGESNHMIRPPSSDNMVSQSNASQMLHEMTRF
NT seq 1917 nt   +upstreamnt  +downstreamnt
atggctgaaattccgtcatcttcaccaaaattaactcaaccatcgaaccctataatggat
accacaaaccaagtatccgccgccggagctgcatcgtcggcgacgtcgtctaatcccgga
attacgatgacttctccgtctaacaacaattcaatcgcacaatcgccttcaattgacctc
cctcaaatcccgttaacccaatctcagcaacagcagcagcagcatcaaattcagatgcag
cagcctcaacaaatgcagcagcagcagcagcaattgacacaatctcaacaacagcagcaa
atgcagctccagcagcagcagaataattcgagtaatcttaacggcagtaacagcaacttg
atgtccgcctctaattttcagatgcagcaaaacttgcagagatcaccctcaatggcgaga
atgagtcaattgcaaatgcaacagcagcaacaacaatttggtttgatgaggcagcaatca
ggaggactttatggtcaaatgaattttggggttggaggtacttcgctccagcaacagcaa
caacaacaattacaacagcagcaacagcaattgcagcaacaatttcaacaacagcaacag
cagcagcaacaacagaaccaacagcagcagcaaataggtggtcagatgggtagcggaaat
ttagctagggcagctttaatgggacagacgggccatctgcccatgttatctggacaagct
gctgttgcagcagcggctgttgcccagttcaatttgcaatctcaatttttgaattcgcca
cgacagaaggcgggtctaatgcaggggaatcaattccatacagggaattcccatggccag
tccttacaggcaatggggatgatgggatctctcaacatgagctctcagctaagggcaaac
ggggccctggcatatgcacaaagggtgaatcaaagtcagctgaggcaacagcagttgtcc
cagcaaaattctctcaccactactcagaaaatatcggctcagagtcttccaaggacgtca
tttgctaactctcagttacctgggttgactcagaatggacaatctgcaattatgcagaac
aattcatcacagcagcagtggttgaagccaatgcctgcgatttctactcctaattcccct
tcctttcgtcttcaacagcaaaggcagcaaatgcttctacaacaccaaaactcaatgggt
ttgaacccacaacaactatcccaaattgtacaacagcagcaacagattgggcaccctcag
atgcatcaacagcaacagcagcagcaacaacaacagcagctttcacatcagcagcaatct
tccccgaggatggctgctccagctggccaaaaatctttgagtttaactggatcacaacca
gatgctactggatccggaacaactactccggggggaagttcaagtcaggggactgaagca
agcaatcagcttcttggaaagagaaagatacaggatttggtttcacaggtggatgcgcag
ggaaagcttgatcctgaagttgaagatcttcttctagagattgctgatgacttcattgat
tcggttactacatttgcttgcaatttggcgaagcatcggaaatcttcaactttggagtcc
aaggatgtactgctacatctagagaaaaactggcacttgactattccaggcttctcaagt
gaagagaggaaacactatccagaaaattcatcaagtgatctccacaaaaagcgtttggat
gtgatacgtaccttgatggagacctcacaaacagaaacaagtacaaatagtagtgctaag
gaaaccgtcagaccaggggcgggtgaatcaaatcacatgatcagacctccaagttcagac
aacatggtttcacagtctaatgcttctcaaatgttgcatgagatgacaaggttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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