KEGG   Candidatus Nanosynbacter lyticus: TM7x_01505
Entry
TM7x_01505        CDS       T03502                                 
Name
(GenBank) hypothetical protein
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
sox  Candidatus Nanosynbacter lyticus
Brite
KEGG Orthology (KO) [BR:sox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sox03009]
    TM7x_01505
Enzymes [BR:sox01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     TM7x_01505
Ribosome biogenesis [BR:sox03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    TM7x_01505
SSDB
Motif
Pfam: tRNA_U5-meth_tr Cons_hypoth95 TRAM MTS Methyltransf_31
Other DBs
NCBI-ProteinID: AJA06797
UniProt: A0A6S4GVU8
Position
complement(287914..289224)
AA seq 436 aa
MGKQIFETLRLEKIVGGGQALGAMNDGRKAFVWGGLPGELVKIRITKKKSHFVEGVVTEV
LEKSPERIMPRDENSYLSTSPWQIMPLSSEQTYKANLIEEAFRLHGVMLPEKIDVFTDGV
EFNYRNKVEFSWFGDKTDNGTRETLDLAFFKRGSKGKVVVEGTSLAHPNINKLAIEIRNL
LRTKPVTARQLKTLLIRTDQQGNAVWQLYIKDRLADLISKEEATQLSAKGSEIIYSDPKS
PASRVTERLNKFGGTTLTDTILGVTFNYACEGFFQVNIPVYEKALSDMRDWIDHENNLPT
LDLYSGVGTIGLTIGGDDITLVEINEHAVAEMQRNITKLNRANAKAILAPSEKSLEYITG
EQIVIVDPPRAGLHADVVRRLLETTPPRIIYLSCNPVTQARDVSLLQEKYEITHHQGYNF
FPRTPHIEHLVVLDKK
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgggaaaacaaatttttgagactttaagactagagaaaatcgttggtggcggccaggcg
cttggtgctatgaatgatgggcgcaaggcgttcgtttggggcgggctaccaggcgaattg
gtgaaaattcgtataactaagaaaaaatcgcacttcgtcgaaggcgtggtgacagaagtt
cttgaaaaaagtccagagcgaattatgccgcgagatgagaatagctatctcagtactagc
ccttggcaaatcatgccgctctccagcgaacagacatataaagcgaatttaatcgaagaa
gctttccgacttcatggcgttatgttaccagagaaaattgacgtatttactgacggcgta
gaatttaactatcgcaataaggtcgagtttagctggtttggcgataagacagataacggc
acgagagaaactttagatttggcatttttcaagcgaggtagcaagggtaaagtcgttgtc
gaagggactagtctggctcatccaaatatcaacaaattggcaattgaaattcgcaacctc
ctgcgaaccaaacctgttaccgcccgacaattaaaaaccctcttgatccgcacagaccaa
caaggaaacgccgtctggcaattatacataaaagaccgactcgcagacctcatttccaaa
gaagaggcaacccaactgtcagccaaaggcagcgagataatctattccgacccgaaaagc
ccagccagccgagtcactgagcgtctgaataaatttggtggcacaacactaaccgacaca
attttgggcgtcacatttaattatgcctgtgaaggatttttccaagttaatattccagtt
tacgagaaagccctaagcgacatgcgcgactggatagaccatgagaataatttaccaacc
ctcgacctttactctggagttggcacaatcgggctgacaattggcggcgatgatattaca
ctagtcgaaattaacgaacacgccgtcgcggaaatgcaaagaaacatcaccaaattaaac
cgagcaaacgccaaggcgattttagcgccaagtgaaaaatctctggaatatataacgggc
gaacaaatcgtcatcgtcgatccaccacgcgccgggctgcacgcagatgtcgttcggaga
ctactggaaactacgccaccacgaattatttacctcagctgcaaccccgtcacccaagcc
cgagacgtcagtctacttcaggaaaaatacgaaatcacacatcatcaaggctacaatttc
ttcccgaggacgccgcatattgagcatttggtggtacttgataaaaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system