KEGG   Sphingomonas panacis: AWL63_14050
Entry
AWL63_14050       CDS       T04760                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
span  Sphingomonas panacis
Brite
KEGG Orthology (KO) [BR:span00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:span03016]
    AWL63_14050
Enzymes [BR:span01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AWL63_14050
Transfer RNA biogenesis [BR:span03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AWL63_14050
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AOH84913
UniProt: A0A1B3ZBV5
Position
complement(3096643..3097818)
AA seq 391 aa
MHIHPLITDSATLANLCTRLAEADFVCVDTEFMRENTFWPELCLIQIADENEAAAIDPMA
PGLDMQPLLDLMVNNPDVLKVFHAGGQDLEIVYNLTGKTPYPLFDTQVAAMALGQGEQIG
YSNLVDAYLGISVDKGARFTDWSRRPLDARQIEYAIGDVTHLAKIFPKMLARLRKTGRGA
WLDQEMERIGDPANYANDPEEAWRRIRVPSRKADILGRLKALARWRELEAQGKNLPRGRI
VKDETIADIAGHPPRKQADLAKVRGLSPTWATNDIGGRMMVALEHAEPMPAEEMPARDDR
KPGLGKDGALVADLLKLLLKIRSRDIDVAARLLARGDDLDALAAGQREGLSILEGWRFEQ
FGRDALDLVEGRLAFAVVGGKLKMTRAETVE
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgcatatccatccgctcattaccgacagcgccacgctcgccaatctctgcacccgcctc
gccgaagccgatttcgtctgcgtcgataccgagttcatgcgcgagaacaccttttggccc
gaactgtgcctgatccagatcgccgacgagaacgaggcggcggcgatcgatccgatggcg
cccggcctcgacatgcagccgctgctcgacctgatggtcaacaacccggacgtgctcaag
gtcttccacgccggcgggcaggatctcgaaatcgtctataaccttaccggcaagacgccc
tatccgctgttcgacacgcaggtcgccgcaatggcgctggggcaaggcgaacagatcggc
tattcgaacctcgtcgatgcttatctcggcatcagcgtcgacaagggcgcgcgctttacc
gactggagccgccgtccgctcgacgcgcgccagatcgaatatgcgatcggcgacgtgact
cacctcgccaagatcttccccaagatgctcgcacggcttcgcaaaaccgggcgcggcgcg
tggctcgatcaggagatggagcgaatcggcgaccccgccaactacgccaacgatcccgaa
gaagcgtggcgccgcatccgcgtgcccagccgcaaggccgatatcctcggccgcctcaag
gcgctggcgcgctggcgcgaactggaggcgcagggcaaaaacctcccgcgcggccgaatc
gtcaaggatgagacgatcgccgacatcgccggccacccgccgcgcaaacaggccgacctc
gccaaggttcgcggcctctccccgacctgggcgaccaacgacatcggcggccgcatgatg
gtcgcactggaacatgccgagccgatgcccgccgaggagatgcccgcgcgcgacgatcgc
aagcccggtctgggtaaggacggcgctttggtggcggacctgctcaagctgcttctaaaa
atccgctcacgcgacatcgacgtggcggcacggctgctcgcgcgcggcgatgatctcgat
gcgctcgcagcgggccagcgtgaggggctgtcgattttggaggggtggcgcttcgaacaa
ttcggccgcgatgcgctcgatctggtcgaggggcggctggcgttcgcggtggtgggcggc
aagctcaagatgactcgcgcggaaacggtggagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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