KEGG   Saprolegnia parasitica: SPRG_02356
Entry
SPRG_02356        CDS       T04137                                 
Name
(RefSeq) ABC transporter E family member 2
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
spar  Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:spar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spar03009]
    SPRG_02356
Ribosome biogenesis [BR:spar03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    SPRG_02356
SSDB
Motif
Pfam: ABC_tran RLI AAA_21 SMC_N Fer4 Fer4_6 AAA AAA_22 TsaE VapE-like_dom AAA_15 Fer4_9 AAA_29 nSTAND3 RNA_helicase Fer4_2 NACHT RsgA_GTPase AAA_28 Fer4_10 Fer4_21 AAA_7 AAA_30 AAA_23 SRP54 Rad17 Fer4_4 AAA_24 Fer4_7 Fer4_16 PIF1 Fer4_17 MeaB
Other DBs
NCBI-GeneID: 24124911
NCBI-ProteinID: XP_012196322
UniProt: A0A067CTT6
Position
Unknown
AA seq 628 aa
MSDKLTRIAIVSADKCKPKKCRQECKKSCPVVRMGKICIEATGKSKIAYISESLCIGCGI
CVKKCPFEAINIINLPKDLENNTTHRYGANTFKLHRLPMPRPGQVLGLVGTNGIGKSTAL
KILAGKLKPNLGRYDSPPEWQEILTYFRGSELQNYFTKILEDNLKAIIKPQFVDRIPKAV
QGQVRQIISDRCQKEGKLDYYMKELDLTHIKDRDLAVLSGGELQRFAICSIAVQKADIYM
FDEPSSYLDVRQRLKAALVIRSMVEGSHLSYCICVEHDLCVLDYLSDYICVLYGSPSAYG
VVTMPFSVREGINIFLAGFVPTENLRFRQEELTFKLAQTADELKGNDDSSANTYTYPNMT
KSMSSGKPGAPTFKLHVETGCFTNSEIICMLGENGTGKTTFIKMLAGGLKSDEMIAAETS
EDYAAQYEASLQYDANVVSYKPQTIAPKFQGSVRALLHKRIRDSYTHPQFLTDVMRPLNI
DDIIDQAVPNLSGGELQRVAIVLCLGKPADIYLIDEPSAYLDSEQRIIASKVIKRFILHA
KKTAFVVEHDFIMATYLADRVIVYKGRPGVECTARTPQSLLSGMNMFLKQLEITFRRDPT
NFRPRINKLNSVKDTEQKSTGNYFFMDD
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgtcggacaagctgacgcgtatcgccatcgtgagcgccgacaagtgcaagcccaagaag
tgtcgccaggaatgcaagaagtcctgccccgtcgtgcgcatgggcaagatctgcattgaa
gcgacgggcaagtccaagatcgcctacatctccgagtcgctctgcattggttgcggtatc
tgcgtcaagaagtgcccgttcgaggccatcaacatcatcaacttgcccaaggaccttgag
aacaacacgacgcaccggtatggcgccaacacgttcaagctccaccgcctgcccatgccc
cgcccgggccaggtgctcggtctcgtcggtacgaacggtatcggcaagtcgacggcgctc
aagatccttgccggcaagctcaagcccaaccttggccgctacgactcgccgcccgagtgg
caggagatcctcacgtacttccgtggctcggagctccaaaactacttcacgaagatcctc
gaagacaacttgaaggcgatcatcaagccgcagttcgtcgatcgcatccccaaggccgtc
cagggccaggtccgtcagatcatcagcgaccgctgccaaaaggaaggcaagctcgactac
tacatgaaggagctcgacctcacgcacatcaaggaccgcgaccttgccgtgctctcgggt
ggtgagctccagcgtttcgccatttgctcgatcgctgtccagaaggccgacatttacatg
tttgacgagccgtcgtcgtacctcgacgtgcgccagcgtcttaaggccgcgcttgtgatc
cgctcgatggtcgagggcagccacctctcgtactgcatctgcgtcgagcacgatctctgc
gtcctcgactacctctcggactacatctgcgtcctgtacgggtcgccgtcggcgtacggc
gtcgtgacgatgcccttctcggtgcgcgaaggcatcaacatcttcctcgccggcttcgtc
ccgactgagaacctccgtttccgccaagaagaactcacgttcaagctcgcgcagacggcc
gacgagctcaagggcaacgacgactcgagcgccaacacgtacacgtaccccaacatgacc
aagtccatgtcgtcgggcaagcctggcgcgccgacgttcaagctccacgtcgagaccggt
tgcttcaccaactcggagatcatctgtatgcttggtgagaacggcacgggcaagacgacc
tttatcaagatgcttgcgggcgggctcaagtcggacgagatgattgcggccgagacgtcg
gaagactacgcggcccagtacgaggcgtcgctgcagtacgacgccaacgtggtgagctac
aagccgcagacgatcgcgcccaagttccagggctcggtccgcgcgcttctgcacaagcgc
atccgcgactcgtacacgcacccgcagttcctcacggacgtcatgcgcccgctcaacatt
gacgacattatcgaccaagccgtgcccaacctctcgggcggtgaactgcagcgcgtcgcg
atcgtgctctgcctcggcaagcccgccgacatttacctcattgatgagccgtcggcgtac
ctcgactcggagcagcgtatcatcgcgtccaaggtcatcaagcgcttcatcctgcacgcc
aagaagacggcgttcgtcgtcgagcacgatttcatcatggccacgtacctcgcggaccgc
gtgatcgtctacaagggccggcccggcgtcgagtgtacggcgcgcacgccgcagagcctc
ctctcgggcatgaacatgttcttgaagcagctcgaaatcacgttccgtcgcgacccgacc
aacttccgcccgcgtatcaacaagctcaactcggtcaaggacacggagcagaagagcacg
ggcaactacttcttcatggacgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (245)   
   KEGG ORTHOLOGY (1)   
   RefGene (241)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (33)   
   Pfam (33)   
All databases (284)   

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