KEGG   Saprolegnia parasitica: SPRG_03820
Entry
SPRG_03820        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
spar  Saprolegnia parasitica
Pathway
spar03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SPRG_03820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spar03009]
    SPRG_03820
   03016 Transfer RNA biogenesis [BR:spar03016]
    SPRG_03820
   03029 Mitochondrial biogenesis [BR:spar03029]
    SPRG_03820
Enzymes [BR:spar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     SPRG_03820
Ribosome biogenesis [BR:spar03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     SPRG_03820
Transfer RNA biogenesis [BR:spar03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    SPRG_03820
Mitochondrial biogenesis [BR:spar03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    SPRG_03820
SSDB
Motif
Pfam: POPLD POP1_N
Other DBs
NCBI-GeneID: 24126300
NCBI-ProteinID: XP_012197807
UniProt: A0A067CWQ9
Position
Unknown
AA seq 694 aa
MEVVEVLSFATARAPELGELHRASGFEKHGHATLLKRRKDFHLRRRTNAYNSHKFPVRLR
NKKRQAADPSVQRCRKHRRRLLLKAKTDYLPTHRWLVKRFVMEHRYGLQVPAHRLDRSIS
AALDAPATIADVSYTAVIELQGSLDAIEEAITMCMDGDLSPDVLAGAVEGSVVLYHPSCF
PLQAIGPVQLMLQPAADDDDTSRVCWVWVHPGIVDEVLHALREAALDGLRIHDRRRKLSR
FEIRGKHAGRIMQQLVVPHGTSTALFWPKDDATPVIQTWSACDPRELPLRQPLVATSVSL
LATPSDVDKSKVLCPITGDDITAPMDRAALAAEPSLEALSTLFASVMRWANAANQDTTYG
DVFPNNPKATKKPTKLAVATDVCASVPVSGLWNHETRLELRRAFVPDHTVNRKPATGRAL
APMPLLVVRHAHGYDLITLPEYAPCVLKAGVFATASAIGMDELDALRTRHGLLSFPRDYP
DTRAGAAFWASVHASEEAKVASRPKAKRVSYASLQVASPFQPSWASLFELNDAMSPDFCV
LRGETYMAPFPFYKPSENAMEDRGFMPMAMPTLICVQLQLPRRGRLDVNAMICMPTDDDV
AAFVADRKWSGFMAPTTKQQQKKGTGLAGRACIGYVTSAIETKNKSPILGTGFCHCEALQ
DVFLPHVANAPLGLVLVRSPTSLQYRPALLSVAA
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggaggtcgtcgaggtgctcagctttgccacggcccgcgccccggagctcggcgagctg
caccgcgcaagtggcttcgagaagcatggccacgcgacgctcctcaagcgccgcaaagat
tttcatcttcggcgccgaaccaacgcctacaactcgcacaaatttcccgtgcgcctgcgc
aacaagaagaggcaggcagcggacccaagtgtccagcgctgccgaaagcatcggcgacga
ctgctgctcaaggccaagaccgactacctcccgacgcaccgctggctcgtcaagcgcttc
gtcatggagcatcggtatggactccaagtgcccgcgcaccgacttgaccgaagcatctcg
gcggcgctggacgcaccggcgacgattgccgacgtctcgtacactgctgtcatcgagctc
caagggtcactcgacgcaattgaagaggctatcaccatgtgcatggacggagatctttcg
ccagacgtgcttgctggcgcggtcgagggcagcgtcgtgttgtaccatccgtcgtgcttc
ccgctgcaagccattgggcctgtccagctcatgcttcagccagcagcagacgacgacgat
acgtcgcgggtctgctgggtatgggtccacccgggtatcgtcgacgaagtgcttcacgcg
cttcgcgaggccgcgctcgacgggctgcgcatccacgaccgccgacgcaagctgtctcgg
tttgagatccggggcaagcacgccggccgcatcatgcagcagcttgtcgtgccgcacggg
acatcgacggcccttttttggcccaaagacgacgcgacgcctgtgattcagacatggagc
gcctgcgacccgcgagagctgccgcttcgccagccgcttgtcgctacgagcgtgagcctc
ctcgcgacaccgtcggacgtcgacaaatccaaggtgctgtgtccgatcacgggcgatgac
atcaccgcgcccatggaccgcgccgcgctggcggccgagccgtcgctcgaagcgctctcg
acgctcttcgcatctgtcatgcgctgggccaatgctgccaatcaagacacgacgtacggc
gacgtctttcccaacaatccaaaggccacgaagaagccaaccaagctagccgtggccacg
gatgtttgcgcgtctgtgcccgtgtcgggcctctggaaccacgaaactcgactcgagctt
cggcgagcgttcgtgcccgaccacaccgtgaaccgcaagcccgcgacgggccgggccctg
gcgccaatgccgctcctcgtggtgcggcacgcccacggctacgacctcatcacgctgccc
gagtacgcgccatgcgtgttgaaagcaggtgtctttgccactgcctccgcgattggcatg
gacgaacttgatgcgctacggacgcggcacggacttctaagctttccgcgagactaccct
gacacgcgcgccggcgcagccttctgggcgtccgtgcacgcctcggaagaggccaaggtc
gcgagccgtccgaaagccaagcgtgtctcgtatgcgtcgctgcaagtcgcgtcaccgttc
cagccgtcgtgggcgagtctctttgagctcaatgacgcgatgtcgcccgacttttgcgtg
ctccgcggtgagacctacatggcgccgttcccgttttacaagccatcggaaaatgcgatg
gaagaccgcgggttcatgcccatggccatgccgacgcttatctgcgtccagttgcagctg
ccgcggcgcggccgcctcgacgtcaatgcgatgatttgcatgcccacggacgacgacgtg
gcggcatttgtggcggaccgcaagtggagtgggttcatggcgcccacgaccaagcagcag
caaaagaagggcactggcctcgcgggccgcgcgtgcattggctacgtgacatcagcgatc
gaaaccaagaacaagagcccgattctgggcacgggcttttgccactgcgaagcgctccaa
gatgtgttcttgccccacgtcgccaacgcaccattggggctcgtccttgtgagaagcccg
acatcgctgcagtatcgaccggcgctgctctccgtggccgcctaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system