KEGG   Saprolegnia parasitica: SPRG_10439
Entry
SPRG_10439        CDS       T04137                                 
Name
(RefSeq) elongation factor 1-alpha 1
  KO
K03231  elongation factor 1-alpha
Organism
spar  Saprolegnia parasitica
Pathway
spar03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPRG_10439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_10439
   03016 Transfer RNA biogenesis [BR:spar03016]
    SPRG_10439
   03012 Translation factors [BR:spar03012]
    SPRG_10439
   04131 Membrane trafficking [BR:spar04131]
    SPRG_10439
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spar04147]
    SPRG_10439
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     SPRG_10439
Transfer RNA biogenesis [BR:spar03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    SPRG_10439
Translation factors [BR:spar03012]
 Eukaryotic type
  Elongation factors
   SPRG_10439
Membrane trafficking [BR:spar04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    SPRG_10439
Exosome [BR:spar04147]
 Exosomal proteins
  Proteins found in most exosomes
   SPRG_10439
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 FlpD
Other DBs
NCBI-GeneID: 24132548
NCBI-ProteinID: XP_012204955
UniProt: A0A067CC13
Position
Unknown
AA seq 384 aa
MPKEKIHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEALELGKSSFKYAWVL
DNLKAERERGITIDIALWKFESPKYFFTVIDAPGHRDFIKNMITVRGRYLEGGQTREHAL
LAFTLGVRQMIVAINKMDDSSVMYGQARYEEIKEEVSNYLKKVGYKPAKRPTDKALRLPL
QDVYKIGGIGTVPVGRVETGVLKPGMVVQFGPVGLQTEVKSVEMHHESLPEAVPGDNVGF
NVKNVSVKELRRGYVASDSKNDPAKGTENFTAQVIVLNHPGQIGNGYSPVLDCHTAHVAC
KFKEITQKMDRRSGKVLEENPKFVKSGDACMVILEPTKPMTVESFQEYPPLGRFAVRDMR
QTVAVGVIHGVVKKEAAGKGGKKK
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgcccaaggaaaagatccacatctcgctcgtcgtcatcggtcacgtcgatgccggtaag
tcgacgacgaccggtcacttgatctacaagtgcggcggtatcgacaagcgtacgatcgag
aagttcgagaaggaagccctcgagctcggcaagtcgtcgttcaagtacgcctgggtcctt
gacaacctcaaggccgagcgcgaacgtggtatcacgatcgacattgccctctggaagttc
gagtcgcccaagtacttcttcacggtcattgatgccccgggtcaccgcgatttcatcaag
aacatgatcacggttcgaggccggtatctcgaaggaggccagacgcgcgagcacgcgctc
ctcgccttcacgctcggcgtgcgccagatgatcgtcgccatcaacaagatggacgactcg
tcggtcatgtacggccaggcccgttacgaggaaatcaaggaggaagtctcgaactacctc
aagaaggtcggctacaagcccgccaagcgccccaccgacaaggccctccgcctcccgctc
caggatgtttacaagattggcggtattggcacggtcccggtcggccgtgtcgagacgggt
gtcctcaagcccggcatggtcgtccagttcggccccgtcggcctccagacggaagtcaag
tcggtcgagatgcaccacgagtcgctccccgaggctgtcccgggtgacaacgtcggcttc
aacgtcaagaacgtgtcggtcaaggaactccgccgtggttacgtcgcttcggactcgaag
aacgaccccgccaagggcacggagaacttcaccgcccaggtgattgtcctcaaccacccc
ggccagatcggcaacggctactcgccggtgcttgattgccacacggcccacgtcgcctgc
aagttcaaggagatcacgcagaagatggatcgccgttcgggtaaggtcctcgaagagaac
cccaagttcgtcaagtcgggtgatgcctgcatggtcatcctcgagcccacgaagcccatg
acggtcgagtcgttccaggagtacccgcccctcggtcgtttcgccgtccgtgatatgcgc
cagacggtcgccgtcggtgtcatccacggcgtcgtcaagaaggaggctgccggcaagggc
ggcaagaagaagtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (417)   
   KEGG ORTHOLOGY (1)   
   RefGene (413)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (434)   

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