KEGG   Saprolegnia parasitica: SPRG_12941
Entry
SPRG_12941        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
spar  Saprolegnia parasitica
Pathway
spar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPRG_12941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_12941
Enzymes [BR:spar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     SPRG_12941
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SPRG_12941
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     SPRG_12941
SSDB
Motif
Pfam: Exo_endo_phos zf-C6H2 Exo_endo_phos_2
Other DBs
NCBI-GeneID: 24134857
NCBI-ProteinID: XP_012208159
UniProt: A0A067BWF9
Position
Unknown
AA seq 519 aa
MKGLDRRAYHFSQSPPRGSPTSGEGRISLRVDQPVEGCEVTTHAFYRSSEGDIDDDDFHL
KFCWYKSNSKRACANKQCPRIGNGEGNVVMLMAKIECAVCSRMGIANEESGFCTPECFRS
GWGQHRQLHDMPSKQQNQQNRTAKDVSAAKEKVRSLDLLNSAMVPVKEETWTALQASKTY
IPTTSDVGHVLRVECTAMYRSGEECGPPKYTETNIVLPFPPLAPKRPMISSIKDAARVRY
IGSFRVLSYNVLAEIYATRQMYPYCPMWALNWSFRKQLLKCELQVYNADILCLQEVQADH
YKNFFQPMMTDLGYEGLYLQKTRESMGLAGKVDGCAMFYRKNRFYLKEQYSLEFNEAAND
FVASLLANFDMAYPTASHHERDSYQASLSRVRQRLVRDNVSQIVVLDVLPEANGSMVRKP
VLPSICVANVHIFSNPDFPDVKLWQTNTLLQQLEQIANSRRLPIILCGDFNSEPPSAVYE
LLSQNHVQSDHPELQQLSEVVPMTKFAHSMPFASAYASV
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgaagggtcttgaccgacgagcgtatcatttctcgcagagcccaccgcgggggtccccg
acgagcggcgaaggtcgcatctcgcttcgcgtggaccagcccgtcgaaggatgcgaggtc
acgacgcatgcgttctaccggtcctcggaaggcgacattgacgacgacgacttccacctc
aagttttgctggtacaagtccaactcgaagcgcgcttgcgcaaacaagcaatgcccacgc
attggaaacggtgaaggcaacgttgtcatgctcatggcgaagatcgagtgcgcagtctgc
tcgcgcatgggcatcgcgaacgaagaatcgggcttttgcacacccgaatgcttccgcagc
ggctggggccagcatcggcagctccacgacatgccatccaagcagcaaaaccagcagaac
cgaaccgccaaggacgttagcgcagcaaaagagaaggtgcgcagcctcgacttgctcaac
tcggccatggtcccggtcaaggaagagacgtggaccgcgctgcaggcctccaagacgtac
atcccgaccacgagcgacgtgggccatgtgcttcgcgtcgaatgcacggccatgtatcgg
tccggcgaagagtgcggcccgcccaagtataccgagaccaacatcgtccttccgtttccg
ccgctggcgccgaagcggccgatgatttcaagcatcaaggacgcggcccgcgtccgctac
attggctcgttccgcgttctctcgtacaacgtgctcgccgagatttacgcaacgcgacag
atgtacccgtactgcccgatgtgggcgctcaactggtcgttccggaagcagctcctcaag
tgcgagctccaagtctacaacgccgacatcctctgcctccaagaagtacaagccgaccat
tacaagaactttttccagcccatgatgaccgaccttgggtacgaaggcctctacctccag
aagacgcgcgagtcgatgggcctcgcgggcaaagtcgacgggtgtgcgatgttttaccgc
aagaatcggttttacctcaaggagcagtactcgctcgagtttaacgaagccgccaacgac
tttgtcgcgtcgctcctcgccaattttgacatggcatacccgacggcgtcgcaccacgaa
cgcgactcgtaccaggccagcctctcgcgcgtgcgccagcgccttgtgcgcgataatgtg
tcgcagatcgtcgtgctcgatgtgttgcccgaggcaaatggctccatggtgcgcaagccc
gtgctaccgagcatctgtgttgcgaacgtgcacatcttttcgaatccggacttcccggac
gtcaagctgtggcagaccaacacccttctccagcagctggagcaaattgccaattcgaga
cggctcccgatcatcctctgcggcgactttaacagcgagccgccgagcgctgtctacgaa
ttattgagtcagaaccacgtccagagcgaccacccggagctgcagcagctctcggaagtc
gtgcccatgaccaaattcgcgcactcaatgccatttgccagcgcctacgcgtccgtgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (68)   

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