KEGG   Sphingomonas paucimobilis: DRN02_013520
Entry
DRN02_013520      CDS       T06034                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
spau  Sphingomonas paucimobilis
Pathway
spau03030  DNA replication
spau03430  Mismatch repair
spau03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DRN02_013520
   03430 Mismatch repair
    DRN02_013520
   03440 Homologous recombination
    DRN02_013520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spau03032]
    DRN02_013520
   03400 DNA repair and recombination proteins [BR:spau03400]
    DRN02_013520
Enzymes [BR:spau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DRN02_013520
DNA replication proteins [BR:spau03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DRN02_013520
DNA repair and recombination proteins [BR:spau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DRN02_013520
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: QBE92912
Position
complement(2870132..2870830)
AA seq 232 aa
MREIVFDTETTGFKFSEGDRLVEIGCVELVNRVETGRTYHAYFNPERSMPAEAQAVHGLS
DAFLKDKPVFAEGVAEFLDFIGDAPLIAHNATFDFGFINGELGALGFPHVCEKTRMVDTL
AIARSKHPGAKHTLDALCSRYGIDRSHRVLHGALLDAQLLAQVYVELMGGRQIGLGLLAD
DAGQGTQTITVTRAPAIVRPPRVFRPSDAELAAHAAFLKGIADPIWGAEASG
NT seq 699 nt   +upstreamnt  +downstreamnt
atgagagagatcgttttcgacaccgaaacgacagggttcaaattttcggaaggcgaccgg
ctggtcgaaatcggctgtgtcgaactggtcaaccgggtcgagaccgggcgcacctatcac
gcctatttcaaccccgaacggtcgatgcccgccgaggcccaggccgtgcacgggctgtcc
gacgcgtttctgaaggacaagccggtctttgccgagggcgtggccgagtttctggatttc
atcggcgacgcgccgctgatcgcgcataatgcgaccttcgacttcggcttcatcaatggc
gagctgggcgcgctgggctttccgcatgtctgcgaaaagacgcggatggtcgacacgctg
gcgatcgcgcgcagcaagcatccgggtgccaagcacacgctcgatgcgctctgctcgcgc
tatggcatcgatcgctcgcaccgcgtgctccacggcgcgcttctcgacgcgcagctcctg
gcccaggtctatgtcgagctgatgggcgggcggcagatcggcctgggtctgctcgccgat
gatgcagggcaggggacgcagacgatcaccgtcacgcgcgcgcctgcaatcgtgcgcccg
ccacgggttttccgccccagcgatgcggaacttgccgcgcatgccgcgtttctaaagggg
atcgccgatccgatttggggggccgaggcgtccggttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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