KEGG   Streptomyces parvulus: Spa2297_20115
Entry
Spa2297_20115     CDS       T04685                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
spav  Streptomyces parvulus
Brite
KEGG Orthology (KO) [BR:spav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spav03021]
    Spa2297_20115
Transcription machinery [BR:spav03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Spa2297_20115
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r4_2 Sigma70_r2 Sigma70_ECF HTH_16 HTH_23 HD_5 GerE
Other DBs
NCBI-ProteinID: ANJ09062
UniProt: A0A191V2A4
Position
4397918..4398505
AA seq 195 aa
MRDDEAPRDQGTVGGLVHRAVDGDEQATHDLLAHVHPLALRYCRTRLSRLPGDARHFVED
LAQEVCVAVLLALPRYKDTGRPFEAFVFAIAAHKVADLQRAAMRHPGSTVVPSDEMPERP
DDSLGPEERALLNSDAAWAKKLLANLPENQRELLLLRIAVGLTAEETGQMLGMSPGAVRV
AQHRALSRLRALAEQ
NT seq 588 nt   +upstreamnt  +downstreamnt
atgcgtgacgacgaggcgccccgtgatcaggggacggtcggtgggctcgtccaccgcgcc
gtcgacggggacgagcaggccacgcacgacctgctcgcccatgtccaccccctcgcgctg
cgctactgccgcacccgtctgtcccgcctgcccggcgacgcccgccacttcgtcgaggac
ctcgcccaggaggtctgcgtcgccgtgctgctcgcgctgccccgctacaaggacaccggg
cgccccttcgaggcgttcgtcttcgccatcgccgcccacaaggtcgccgacctgcagcgc
gcggcgatgcgccacccgggctcgaccgtcgtcccgtccgacgagatgccggagcggccg
gacgactccctgggcccggaggagcgcgcgctgctcaacagcgacgccgcctgggccaag
aaactgctggccaacctgccggagaaccagcgcgagctgctcctgctgcgcatcgcggtc
gggctcacggccgaggagaccggccagatgttgggaatgtcacccggtgccgtgcgcgtc
gcccagcaccgggcgctgagccggctgcgggcgctggccgagcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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