KEGG   Shewanella putrefaciens CN-32: Sputcn32_1830
Entry
Sputcn32_1830     CDS       T00513                                 
Name
(GenBank) integration host factor, alpha subunit
  KO
K04764  integration host factor subunit alpha
Organism
spc  Shewanella putrefaciens CN-32
Brite
KEGG Orthology (KO) [BR:spc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spc03032]
    Sputcn32_1830
   03036 Chromosome and associated proteins [BR:spc03036]
    Sputcn32_1830
   03400 DNA repair and recombination proteins [BR:spc03400]
    Sputcn32_1830
DNA replication proteins [BR:spc03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Sputcn32_1830
Chromosome and associated proteins [BR:spc03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    Sputcn32_1830
DNA repair and recombination proteins [BR:spc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      Sputcn32_1830
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: ABP75553
UniProt: A4Y6H0
Position
2092462..2092758
AA seq 98 aa
MALTKAEMAEHLFETLGMNKRVAKEMVESFFEEIRGALESGEQVKLSGFGNFDLRDKNQR
PGRNPKTGEDIPISARRVVTFRPGQKLKTRVEAANTGK
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcacttaccaaagccgaaatggcagaacatctttttgaaacactgggaatgaacaag
cgtgtcgccaaagagatggttgagtcgttctttgaagaaattcggggcgcacttgaaagt
ggtgagcaggtcaagttatctggctttggcaactttgaccttagggacaagaatcaaaga
ccgggaaggaacccaaaaacaggcgaagatattcctatttctgctcgccgtgtcgtgact
ttccgtcccggccagaagctgaaaactcgtgtagaagctgcaaatacgggtaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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