KEGG T06466: G6053

Sphingobacterium sp. DR205: G6053_19725

Entry

G6053_19725       CDS       T06466

Name

(GenBank) RluA family pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

spdr Sphingobacterium sp. DR205

Brite

KEGG Orthology (KO) [BR:spdr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spdr03009]
    G6053_19725
   03016 Transfer RNA biogenesis [BR:spdr03016]
    G6053_19725
Enzymes [BR:spdr01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     G6053_19725
    5.4.99.29  23S rRNA pseudouridine746 synthase
     G6053_19725
Ribosome biogenesis [BR:spdr03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    G6053_19725
Transfer RNA biogenesis [BR:spdr03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    G6053_19725

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

QIH34987

UniProt:

A0A6G7BYQ8

Position

4524569..4526257

AA seq 562 aa
MGTLDNNAYFHSFKEDISGIELPSRFTFPFCYEPHPLAIIAAQQLQAYLEIQNEWTHNFG
LEENNDGHAIGKMFGILVVRDQQHRLGYLAAVSGKLAGSNKHSYFVPPIFDMLEKDGFFL
NEEVHLNALNRKIELLENSAELAQTKSNLNRLKDQWDTALDLLKTKLRNQKKERKETRTR
LRPILSDEAYETLMEDMRNQSLKDKQELQRYQYDMHLALESENLKLQRLLSDILAMKEER
KTRSGNLQRQLFEQYNFLNAEGQQKNVIAIFQDFDQSTPPAGSGECAAPKLLQYAYSHNL
TPIALAEFWWGCSPASEIRRHKNYYPACRKKCEPILGYMLQGLTVDPNPMQQETTLQTEL
PQIYEDEDIIVFNKPAEFLSVPGIYVKDSVYTRVLKRYPNAGPIIIHRLDMSTSGLLVVA
KNKVAHQFIQDQFIQHTITKEYIALLDGVIEQECGLIDLPLRVDLDDRPRQMVCYTYGKP
AQTKWERIAVENGKTRVRFYPLTGRTHQLRMHAVHPEGLNTPILGDDLYGRKANRLHLHA
AFIKFIHPGSRQEISFQIPSDF

NT seq 1689 nt +upstreamnt +downstreamnt
gtgggtactttagacaacaacgcttattttcattcattcaaggaggatatttcgggcatc
gaactcccgtcgcgattcacttttccgttttgctatgaaccgcatccgctagccattatt
gctgcgcagcaactccaggcctaccttgagatacaaaacgagtggacacataactttggt
cttgaagaaaataatgatggtcatgccataggcaagatgtttggtatattggttgtccgc
gatcagcagcatcgcctcggatatcttgcggctgtatcaggcaagcttgctggcagcaac
aaacacagctactttgtgccccctatatttgacatgctggaaaaggatggcttctttttg
aatgaagaagtacacttaaatgcgctcaacagaaaaattgaacttcttgaaaacagcgcg
gaactggcgcaaacaaaaagcaatctcaatagactaaaagatcaatgggacacagcgctt
gacctgctcaaaacaaaactcagaaatcagaaaaaagaacgtaaggaaacccgaaccaga
ttgcgccctatcctgtcagacgaagcgtatgaaacgctgatggaagatatgcgtaaccaa
agcttaaaggataaacaagaacttcagcgctatcaatatgacatgcatctggccctggaa
tcggaaaaccttaagctccaacgattgctttccgatattttggcaatgaaagaggagcgc
aagacccgatcgggcaatctgcaaagacaactttttgaacaatataattttttaaatgct
gaagggcagcaaaagaatgtgattgccatttttcaggattttgaccaaagtacacctcct
gcaggctccggagaatgtgctgcgcccaaattattacaatatgcctacagccacaatctt
acccccatagcactggccgaattttggtggggctgttcccctgcttccgaaatccgtaga
cataaaaattactatccggcctgccgtaaaaaatgtgaacctattctgggttacatgctt
cagggacttacggtcgacccgaatcccatgcaacaggaaaccaccttgcaaacagaactc
ccgcagatctatgaggatgaagatattattgtcttcaacaaacccgcagagtttttatcc
gttcccggtatatatgtgaaagattccgtctatactcgtgttctcaaacgctatccaaat
gccggcccgattattatccatcggctggacatgtccacttcggggcttttggtggtagcc
aaaaacaaggtggcgcatcaattcatccaggaccaatttatacaacataccataaccaag
gagtacattgctttactcgatggtgttattgaacaggaatgtggactgattgatctgcct
cttcgtgtggatttggatgacagaccccgacaaatggtctgttatacctatggaaagcca
gcacagaccaaatgggaaagaattgctgtcgaaaatggtaaaacacgcgttcgcttctat
cctttaacaggccggacacatcaactccgtatgcacgctgtacacccagaagggctgaat
accccgatcttgggtgatgatctatatggcagaaaagcaaataggttacacctgcatgct
gcttttattaaatttattcacccgggctccagacaggaaatctcttttcaaatcccgtcg
gatttttag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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