KEGG   Streptococcus periodonticum: EHW89_05375
Entry
EHW89_05375       CDS       T06568                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spei  Streptococcus periodonticum
Pathway
spei03410  Base excision repair
spei03430  Mismatch repair
spei03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EHW89_05375 (recJ)
   03430 Mismatch repair
    EHW89_05375 (recJ)
   03440 Homologous recombination
    EHW89_05375 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spei03400]
    EHW89_05375 (recJ)
DNA repair and recombination proteins [BR:spei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     EHW89_05375 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     EHW89_05375 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      EHW89_05375 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 Toprim AlaDh_PNT_C DUF5760 DsrE
Other DBs
NCBI-ProteinID: AZQ41922
UniProt: A0A3Q9F477
Position
complement(1098849..1101083)
AA seq 744 aa
MITSKYDWQIATNFSDEGFIKKAKKLGLEASVANLVYQRGIQTEEALRDFLEPSLDQLHD
PYELYDMDKAVTRIRQAIENYEQILIYGDYDADGMTSASIVKEALEQLGAECQVYLPNRF
TDGYGPNASVYKYFIENQGISLIVTVDNGVAGHEAIELAQSMGVDVIVTDHHSMPEVLPD
AYAIIHPEHPEASYPFKYLAGCGVAFKLATALLEEVQVELLDLVAIGTIADMVSLTDENR
ILVKYGLSILKNTQRIGLQELFKIAGIQENEVDEETVGFQIAPRLNALGRLDDPNPAIEL
LTGFDEEEARDIALMINQKNEERKEIVQKIYDEAKTMVDLNKPVQVLAGEGWNPGVLGIV
AGRLLEELHQPVIVLNIENDLAKGSARSIEAVDIFEALDPHRDLFVAFGGHAGAAGMTLE
ASKLEALSQVLVAYSEDNQVDLSTKNELFLDEELSLPDLTLETLKNFEKLAPFGMDNKKP
VFYLKDFKIENARTMGAGNTHLKLKISQADAVFEVVAFGLGNLATEFSQTKNLELAVTLS
VNKWNGQTSLQLMLVDARVNGIQLFNIRGKNAPLPENVPVLRFSEEMPNLEKSRAVVVYD
LPKRLNQLKVIIQQGHFEAIYFKNEIAQPYYLTGFGTRDQFAKLYKTIYQFPEFDIRYKL
KELAAYLKIDPILLIKMIQIFEELDFVTIQDGVMQVNKKAEKKAIENSHIYQELKKTVKE
QELMALGTVQEIYDYLIEKDEFSN
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgattacatcaaaatatgattggcagattgccacaaatttttcagatgagggttttatt
aaaaaagctaaaaaacttggcttggaggcttcggtagctaatctggtctaccagagaggg
atccagacagaagaagcactgcgagattttctagagcctagtttggaccagctgcatgat
ccttatgaactgtatgatatggataaggcagtgacgcgcattcgtcaagcaattgaaaat
tatgagcagatcttgatttatggagattatgatgcggatggcatgacttcggcttctatt
gttaaagaagcactagaacaacttggagcagagtgtcaggtctatttgcccaatcgattt
acagacggttatggtcctaatgccagtgtctacaagtattttattgaaaatcagggaatt
tcactcatcgttacagtggataatggtgttgcaggacatgaagcaatcgaactagctcag
tctatgggagtggatgtcattgtgacggatcaccattctatgccagaggtacttcctgat
gcttatgcaattattcacccagaacatccagaagcaagctacccattcaaatatttagct
ggttgcggtgtagcttttaagttagcaactgctcttttagaggaagtacaagtagagttg
ttagatctagtcgctattgggactattgcagatatggtcagtctaacggatgaaaatcgc
attctggttaaatatgggttaagcatcctcaaaaacactcaacgaatcggcttgcaggag
ctttttaagattgcaggtattcaggaaaatgaagtggatgaagaaacagttggttttcag
atagcccccagactcaatgctctaggtcgacttgatgatccaaatcctgctattgaactt
ctgacgggctttgatgaggaagaagcgcgtgacattgcccttatgattaaccagaaaaat
gaagagcgcaaagaaattgttcagaagatctatgatgaagccaagaccatggttgatctc
aataaacctgttcaggttctagccggtgaaggttggaatccaggtgttttgggaattgtg
gcagggcggcttttggaagaattgcaccagccggtcattgtcttgaatattgaaaatgat
ttagcaaaaggcagcgcccgcagcattgaagcagtcgatatttttgaagcgttagaccct
catcgagatttatttgtggcttttggtgggcatgcaggggcagctgggatgactctagag
gccagcaagttagaagcactcagccaggttttggtagcatatagtgaagataatcaagtg
gatttgtccactaagaatgagctctttttggatgaggaattatccttgccagatttgaca
ctagagaccctcaaaaactttgaaaagttagctccttttggcatggacaataaaaagcct
gttttttatttgaaagattttaaaattgaaaatgcccgcaccatgggagcagggaatact
caccttaagctgaaaatttctcaggctgacgcagtttttgaggtcgtagcttttggtcta
ggtaatcttgcaacagaattttcccaaactaaaaacttagagctggcggttactctgtcg
gtcaataaatggaatggtcaaactagtctccagcttatgctggtggatgctagggtcaat
gggattcagctctttaatatccgaggtaaaaatgctcctttgcctgaaaatgtgcccgtc
ctgcgtttttcagaagaaatgcctaatttggaaaagagcagagcagttgtggtgtatgac
ttgcctaaacgcctaaatcagctcaaagtaatcattcagcaaggacattttgaagcaatt
tactttaaaaatgagattgctcagccctattatctgacaggtttcggaacgagagaccag
tttgcaaaactctataaaacaatttatcaatttccagagtttgacattcgttataagctc
aaagaactagctgcttatctcaagattgacccaattctactcatcaagatgattcagata
tttgaagagctggactttgtgacaattcaagatggagtgatgcaagtaaacaaaaaagca
gaaaaaaaggctattgaaaacagccatatttatcaagaactgaagaaaacagtcaaagag
caggagcttatggctctaggaacggtgcaggaaatttatgattatctgatagaaaaagat
gaattttcaaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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