KEGG   Solanum pennellii: 107002803
Entry
107002803         CDS       T04130                                 
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
spen  Solanum pennellii
Pathway
spen03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107002803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107002803
   03016 Transfer RNA biogenesis [BR:spen03016]
    107002803
Enzymes [BR:spen01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     107002803
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     107002803
Transfer RNA biogenesis [BR:spen03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    107002803
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 PAP_NTPase TUTase Polbeta Nrap_D2
Other DBs
NCBI-GeneID: 107002803
NCBI-ProteinID: XP_015056459
Position
10:complement(1480101..1488057)
AA seq 521 aa
MEVEGILYETLRPLSAAGTTTTATDDLPPSLSSSDEHEPYVVFRNQISLSNLQCPSPETA
APDYFSLDLDGDASDLNNGSVSTPVPAATPLRDKEVERGLEGNWFRANCRFKSPMLQLHQ
EIIDFCEFLSPTLEEQASRNEAIECVFNVIKYIWPNCKPEVFGSFKTGLYLPTSDVDLVI
LGSEIRSPQIGLQALSRALSQKGVAKKIQVISKARVPIIKFVEKKSGISFDISFDVENGP
KAADFIKDAMSSWPPLRPLCLILKVFLQQRELNEVYTGGIGSYALLVMLIAMLQNHRNGQ
ASAEENLGILLVNFFDIYGRKLNTSDVGVSCNGEATFFLKSCKGFSIKGKQSLISIEDPQ
TPENDIGKSSFNYFQVRSAFSMAFTTLTNAKAILALGPNRSILGTIIRPDEVLVERKGGS
NGEVTFNNLLPGAGEGLQQYGDQQEIYCNWQLNDNEEALPRGNGIAENGGVQSSGKKRKS
SKDKQPAKKVKENVHSSHIRDEENSSRKEKSSKRHWKHNRW
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggaagttgagggcattttgtacgaaactctccgtccactctccgccgccggcaccacc
acaaccgccaccgacgacttacctccgtcgttgtcgtcctccgatgagcatgaaccctac
gtcgtattccggaatcagatttcactatccaatctccagtgtccctcaccggaaactgcc
gcgcctgattacttctcactcgacctcgatggagacgcttccgacttgaataacggttcc
gtatcgacgccggtaccagctgctactcctttgcgggataaagaagtagagagaggactt
gaaggcaattggtttcgtgctaattgtcggtttaagagtcccatgcttcagcttcaccaa
gagataatagatttttgtgagtttttatcacctacactggaggagcaagcatctcgtaat
gaagcaatagaatgtgtttttaatgttattaaatatatctggcccaactgcaagccagag
gtctttggatcattcaagacagggctttatcttcccactagtgatgttgatctggtgatt
ttagggtcagaaattagaagtcctcaaattgggttgcaagctctttccagagctctctca
cagaaaggagttgcgaagaagatacaggtgatttcaaaggctcgtgtgccaataataaaa
tttgtggagaagaaaagtggcatttcatttgacataagctttgatgtggaaaatggaccc
aaagctgctgattttattaaggatgctatgtctagctggccccctctgcgaccattatgc
ttgattttgaaagtgttcttgcaacagagagagctaaatgaggtttatactggtgggatt
ggatcctatgctctgcttgtaatgctcatagcaatgttgcagaaccatcgaaatggtcaa
gcttctgcggaggagaatctgggaattcttttggttaatttctttgatatttatggacgc
aaactaaatacatcagatgttggtgtatcttgtaatggagaagctaccttcttcctgaag
agttgcaaagggttctcaattaaaggaaagcaatctctcatctccattgaggatccacag
acaccagaaaatgacataggcaagagctccttcaattattttcaggtcagatctgctttt
tcaatggctttcactacattgacaaatgcaaaagccatacttgcccttggtcccaacagg
agtatacttggcacaataattagaccagatgaagtactagtggaaaggaaaggaggatct
aatggggaagtgacttttaataacttgctcccaggcgctggggagggactgcaacagtat
ggtgaccagcaagagatctactgtaactggcaattaaatgataacgaagaagcactcccc
cgaggaaatggtattgcagagaatggtggtgttcaatcctcaggaaagaagaggaaatct
tccaaggataaacaacctgctaagaaggtgaaggaaaacgtgcatagcagtcatatcaga
gatgaagagaattcctcgaggaaagagaagagttcgaaaaggcattggaaacataataga
tggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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