KEGG   Solanum pennellii: 107005867
Entry
107005867         CDS       T04130                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
spen  Solanum pennellii
Pathway
spen00040  Pentose and glucuronate interconversions
spen01100  Metabolic pathways
Module
spen_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:spen00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107005867
Enzymes [BR:spen01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     107005867
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 107005867
NCBI-ProteinID: XP_015060003
Position
12:916937..919928
AA seq 409 aa
MDMKIKFVYFGLGVLFLAHFGESQNATFDITKYGATANADISEAVGKAFKEACASTSPST
IVIPKGTFQMNQVKLEGPCKGPIELQIQAILKAPTDPNAIKTGEWLTVNKLDFFTMSGGG
TLDGQGKEAWECKKSKKCTKLPNNLSFNSLTNSIIKDITTLDSKAFHVNVNQCKNITFTK
FNVSAPADSPNTDGIHVARASSVNITESAFSTGDDCISIGDETEQLYITKVTCGPGHGIS
VGSLGGNPGEKPVVGVFVKNCTLVSTDNGVRIKTWPASHPGVVSDIHFEDIIVQNVSNPI
VIDQVYCPSGKCNKDLPSQVKISKVSIQNIKGTSRTHNAVSLTCSKGSPCEGVEVGDVDI
SYSGKEGPAKSSCENIKPTFKGKQTPAICSAGADAPANAPAPAAAAAAS
NT seq 1230 nt   +upstreamnt  +downstreamnt
atggatatgaaaatcaagtttgtttattttggattgggtgtgttatttctagcacatttt
ggagaatctcaaaatgcaacttttgatataaccaaatatggtgccacagccaatgctgat
attagtgaggctgttggaaaagcttttaaagaggcatgtgcatcaacaagtccaagtaca
atcgtgatcccaaaaggaacatttcaaatgaaccaagtgaaattagaaggaccatgcaaa
ggccctattgaacttcaaattcaagccattttgaaagcaccaacggaccctaatgcaatc
aagactggtgaatggttaacagtcaacaaacttgatttcttcacaatgtctggtggtgga
acacttgatggtcaaggtaaagaagcatgggaatgcaaaaagtcaaaaaagtgcaccaag
cttcccaataatttgagcttcaactccctcacaaattccataatcaaggacataacaaca
ttggatagcaaagcattccatgtgaatgttaaccaatgcaagaacataacattcaccaaa
ttcaatgtcagtgctccggctgatagcccgaacactgatggaatccacgtggcgagagca
agctctgtgaatatcacagagtctgctttctccacgggagatgattgtatctccattggc
gatgaaacggaacaactttacatcactaaagtcacttgtggacctggtcatggtattagt
gttggttcccttggtggaaatcctggtgaaaagccagttgttggtgtttttgttaaaaat
tgcactttagttagcactgataatggtgttaggatcaagacatggcctgcttcacatcct
ggtgttgtatctgatatacattttgaagatatcattgtgcaaaatgttagcaaccctatt
gtcattgatcaagtttattgcccaagtggaaaatgcaacaaagacttgccttcacaagtg
aagattagcaaggtgtctatccaaaacataaaaggtacatcaagaactcataatgcagtc
tcactaacttgtagcaaaggctcaccatgtgaaggtgttgaagttggagatgttgacatt
tcatatagtggtaaagaaggaccagcaaaatcaagttgtgaaaatattaagccaactttt
aagggaaaacaaactccagctatttgttcagctggtgctgatgctcctgctaatgctccc
gctcccgccgcggccgccgcagcttcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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