KEGG   Solanum pennellii: 107007006
Entry
107007006         CDS       T04130                                 
Name
(RefSeq) eukaryotic initiation factor 4A-2
  KO
K03257  translation initiation factor 4A
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107007006
   03012 Translation factors [BR:spen03012]
    107007006
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spen04147]
    107007006
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     107007006
   mRNA cycle factors
    Stress granule specific factors
     107007006
Translation factors [BR:spen03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    107007006
Exosome [BR:spen04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107007006
  Exosomal proteins of bladder cancer cells
   107007006
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1 AAA_19 DUF2780 Methyltr_RsmF_N
Other DBs
NCBI-GeneID: 107007006
NCBI-ProteinID: XP_015060970
Position
12:complement(80923136..80928697)
AA seq 413 aa
MAGSAPEGSQFDARQFDAKMTELLGTEQQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP
DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
GRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVIEELPANVADLL
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggcaggctcggcaccagagggttctcagtttgatgctcgtcaattcgatgcaaaaatg
acggagctacttggtactgaacaacaagattttttcacatcatatgatgaggtttatgac
agctttgatgccatgggtttgcaagaaaaccttctgagaggcatctatgcctatggtttt
gagaagccatcagctattcagcaaaggggcatcgttcccttttgcaagggccttgatgtt
atccagcaggcacaatcaggaactggaaagacggcaactttctgctctggagttctccag
caacttgattacagtttagttgaatgtcaggctcttgttcttgcaccaacccgtgagctg
gcacaacagattgagaaggttatgcgtgcgctcggtgactatctgggcgtgaaggttcat
gcgtgtgttgggggtaccagtgtccgtgaggatcagcgtatccttcagagtggtgttcat
gtggtagttggtactccaggccgtgtctttgacatgttgcgcagacagtctcttcgcccc
gaccacatcaagatgtttgttttggatgaagctgatgaaatgctctctagaggtttcaag
gatcagatttatgatatattccagcttttgccaccaaagatccaagtgggtgttttctct
gctacaatgccaccagaggctcttgagattactagaaaattcatgaacaagccagtgaga
attcttgtgaagcgtgatgagctcactcttgaaggtattaagcaattctatgtcaacgtc
gataaggaagagtggaaacttgaaacactttgtgatctttacgagaccttggccatcacc
cagagtgtcatctttgttaacaccaggcgaaaggttgattggctcactgacaaaatgcgt
ggtcgtgatcacacagtatctgcaactcacggagacatggatcagaacactagggatatc
attatgagggagttccgatctggctcatctcgtgtgcttatcaccaccgatctccttgct
cgtggtattgacgtccaacaagtctcccttgtcatcaactatgatctgcctactcaacca
gaaaactacctgcatcgtattggtcgtagtggacgatttggaaggaagggtgttgctatc
aactttgttaccaaggatgatgaaaggatgctttttgacattcaaaagttttacaacgtc
gtaatcgaggagctcccagccaatgttgctgatctcctttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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