KEGG   Solanum pennellii: 107011400
Entry
107011400         CDS       T04130                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
spen  Solanum pennellii
Pathway
spen04145  Phagosome
spen04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:spen00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107011400
  09142 Cell motility
   04814 Motor proteins
    107011400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107011400
   03036 Chromosome and associated proteins [BR:spen03036]
    107011400
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:spen04812]
    107011400
   04147 Exosome [BR:spen04147]
    107011400
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107011400
Chromosome and associated proteins [BR:spen03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     107011400
Cytoskeleton proteins [BR:spen04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    107011400
Exosome [BR:spen04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107011400
  Exosomal proteins of other body fluids (saliva and urine)
   107011400
  Exosomal proteins of colorectal cancer cells
   107011400
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 107011400
NCBI-ProteinID: XP_015066381
Position
2:54322283..54324208
AA seq 450 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIKPDGQMPGDVTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRKSLDIERPTYTNLNRLISQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNTAFEPSS
MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGCESGDGEDDENEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagagagtgcatctccatccacattggccaggccggaatccaggtcggaaacgcctgc
tgggagctctactgcctcgaacatggtatcaagcctgatggacaaatgcccggagacgtc
actgttggaggaggagatgatgctttcaacacctttttcagtgaaacgggtgctggaaag
catgtacctcgtgctgtttttgtagatctggaacctactgttattgatgaggtgaggacc
ggaacttaccgtcagttgttccaccctgaacagctcatcagcggcaaagaagatgctgct
aacaactttgccagaggacattatacaattgggaaggagattgtggatctgtgtcttgat
agaataaggaagttagctgacaactgcactgggcttcaaggatttttggtgttccatgct
gttggtgggggtactggttcagggctcggttctctgcttcttgagaggctttctgttgac
tacggaaagaaatccaagcttggattcaccatttacccttcacctcaggtctctactgct
gtagttgagccttacaactctgtgctctcaacacactcgcttcttgagcacactgatgtt
gctatccttttggataatgaagccatttatgacatctgccgtaaatctctcgacattgaa
agacctacttacaccaatcttaacaggcttatttctcaggttatctcatcgctgacagct
tctctgcgtttcgatggtgctttgaatgtggatgtaaatgagttccaaactaacttggtt
ccatacccaaggattcatttcatgctttcctcatatgcgcctgtgatctctgctgagaag
gcctaccatgagcaactttctgttgctgaaattactaatactgcatttgagccatcgtct
atgatggtcaagtgtgacccacgccatgggaaatacatggcctgctgcttgatgtacaga
ggtgatgttgtgcccaaggatgtaaacgcggctgtagccacaattaagaccaagaggacc
attcaatttgtggactggtgcccaactgggttcaaatgtggtatcaattaccagccacca
actgttgtccctggtggagacttagccaaggtgcagagggctgtttgtatgatttcaaac
tcgactagtgttgctgaggtcttctcaagaattgaccacaagttcgatttaatgtacgcg
aagagggcttttgttcactggtatgtgggtgaaggtatggaggaaggagagttctctgag
gctagagaagatttggctgcgcttgaaaaggactatgaggaagttggatgcgagtctggt
gatggtgaagatgatgaaaatgaagagtattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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