KEGG   Solanum pennellii: 107012887
Entry
107012887         CDS       T04130                                 
Name
(RefSeq) exonuclease 1 isoform X1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
spen  Solanum pennellii
Pathway
spen03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    107012887
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spen03032]
    107012887
   03400 DNA repair and recombination proteins [BR:spen03400]
    107012887
DNA replication proteins [BR:spen03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    107012887
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     107012887
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc_N 5_3_exonuc
Other DBs
NCBI-GeneID: 107012887
NCBI-ProteinID: XP_015068336
Position
3:72354894..72358741
AA seq 544 aa
MGIKDLLRFMKPYVETAHIKKYAGKRVGIDAYSWLHKGAYSCSMELCLNSEGDKKLQYLN
YFMHRINMLRHYKITPVVVFDGGNLPCKSATEDERHKRRKTNRDQATLKLKEGNVAGAVE
LFQRAVSVTPSMAHHLIQILKSENIEFVVAPYEADAQLAYLSNLKEEKNGIVAVISEDSD
LLAYGCPAVFFKMDAHGNGQEVVLDHVFSCDTRVPSFRHFNKDLFTGMCVLAGCDFLPSV
PGIGITRAYNLVSKYRNLDRVLSMLKFEKGDQMPEDYTKSFREAVAVFHHARIYDVSLKR
MKHLKPIPEELLQFLDEELDFLGPEILPSLAMSIAQGNIDPCTMEAFDVFPSKVNHVSTA
NIKKISGPFSRQEAFTQASKDSSVFAISSSKSRKETTVVETTQASGAEQTQCPFMDESEC
LEEAVALQNMICPSISTRKMVAEAKKSHRKEVLKVPDNNPFRKRKVEEFEPDEMDSVTEL
VSAVTDVESLEVICTIPESQQSVESKPVKRIELKRVTKEKKVKRSNSQSSENKKNTILNF
FSRV
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgggtatcaaagatctcctccggttcatgaagccctatgttgaaactgcccacataaaa
aaatacgccggcaaaagggtgggaatcgatgcttattcttggcttcacaaaggagcatat
tcatgtagtatggagctttgccttaattcggagggtgataagaaattgcagtacttgaat
tacttcatgcatcgaatcaatatgcttcgacattataagatcactcctgtagttgttttt
gatggtggcaacttaccctgcaagagtgctactgaagacgagagacacaagagaaggaaa
acaaatagagatcaggcaacgttgaagctaaaggaaggcaatgttgctggcgccgttgag
ctcttccagagggctgtgagtgtcactccttcaatggcgcatcatctcatacagattctg
aagtcagagaatatagaattcgttgtcgcaccatatgaagcggatgcacaattagcctac
ttgtctaacctcaaagaagaaaagaatggaattgtggcagtgatttctgaagatagtgac
ttactagcatatggctgtcccgctgttttctttaagatggatgcccatggaaatggtcaa
gaagtggtactagaccatgttttcagttgtgatactcgtgttccttccttcagacatttc
aacaaagatttatttacaggcatgtgtgtattagctggctgtgattttcttccttcagtc
cctggtataggaattactagagcttataatctggtctccaaatatcgcaacttagatcga
gttctttccatgttaaagtttgagaaaggagatcaaatgcccgaagattacacaaaatca
tttcgagaagcagttgcagttttccatcatgctagaatatatgatgttagtttgaagcgg
atgaagcacttgaaacccatcccagaagagctgttgcagtttttagacgaagaacttgac
ttcttaggaccagaaattcttccgtcattggcaatgtcaattgctcaaggtaacatagat
ccttgtacaatggaggccttcgatgtctttcccagtaaagtaaatcatgtgtctactgca
aacatcaagaaaatttctggtcccttctctcgacaagaggcatttactcaagcttcaaaa
gacagcagcgtttttgctatttcttcaagtaaatccagaaaagaaacaacagtggtggag
acaacacaagcctctggtgctgaacagacgcagtgtccgtttatggatgaaagtgaatgc
ttggaggaagcagtagctcttcaaaacatgatatgcccttcaatatcaactcggaagatg
gtggcagaagcgaaaaagagtcatcgaaaagaagtgctgaaagttccagataataatcct
tttaggaaaagaaaagtggaggaatttgagccagatgagatggatagtgttactgaacta
gtctcagccgttactgatgttgaaagcctggaagttatatgcacaattccagaatcacaa
cagagtgtggaatctaagccagttaaaaggattgagttaaaaagagttaccaaagaaaag
aaggttaagaggagtaatagccaaagttcagaaaataagaaaaacactatactaaatttc
ttttctcgagtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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