KEGG   Solanum pennellii: 107013681
Entry
107013681         CDS       T04130                                 
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
spen  Solanum pennellii
Pathway
spen03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107013681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107013681
   03036 Chromosome and associated proteins [BR:spen03036]
    107013681
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107013681
Chromosome and associated proteins [BR:spen03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    107013681
SSDB
Motif
Pfam: Nup96 Nucleoporin2
Other DBs
NCBI-GeneID: 107013681
NCBI-ProteinID: XP_015069037
Position
3:complement(70842992..70850667)
AA seq 1033 aa
MEVDLGNPEQLIVSQSQCKRRKISALDQILGENEADLPTLRSPDYFTEPCLSELAVRELM
SSGYCSKVENFTVGRFGYGFVKFSGETDVRGLDLDRIVKFSKHEVIVYEDENDKPPVGMG
LNKPAEVTLLLEIRSSKHCDVDSSRDLVEKLRLRTERQGACFISFDPSNGEWKFFVQHFS
RFGLNDEEEDEDMIIDGVSPEVQDPADMIGADVSDIDEETCLANTTDLSHSLPAHLGLDP
VKMKEMRMLMFPAEEEDIDDYPGVPFDRKPQFGIESSKSPLQHKFQRVSPPLTRKTPLAL
IEYKHGSFGSDSPGSILLTQQNKGVLLKTTKTEGFKLDVRQQTPISGTYSCNVVDAGLFM
GRSFGVGWGPNGVLIHSGAPVGSKDNQSLSSIINLEKVAFDQVARDENKKVREELVDLCF
DSALHLHKEITHETKEFGEGPFVLKLQRLVCDRLILSDVCRSYIGVIERQLEVPDLSPAS
RVLLMHQAMIWELIKVLFSTRQLSGQLKSLEDEDEEDMIPDARETAADVDREALPLIRRA
EFSYWLQESVCHRVQEEVSSLNDSSDLQHMFLLLTGRQLDAAVELAASRGDVRLACLLSQ
AGGSMVNRSDVARQLDIWRVNGLDFNFVETERIRVLELVAGNIHRALHDVDIDWKRFLGL
LMWYQLPPETELPIVFRTYQRLLNEGKAPSPVPVYIDEGPIEVSMNWNAVKHFDLGYYLM
LLHANQEIDFSALKTMFSAFASTNDPLDYHMIWHQRAVLEAIGAFSSNDLHVLDISFISQ
LLCLGQCHWAVYVVLHMPHREDCPYLQAALIREILFQYCETWSSQDLQRQFMEDLGIPSA
WLNEALATYFNYYSEFPKALEHFLECGKWQKAHTIFMTSVAHSLFLSEEHSEIWRLAASM
EDHKSEIEDWDLGAGIYISFYLLRSSLLEDSDTMNQDTIENKDNACADFISRLNNSLAVW
TNRLPVKARVVYSKMAEEICSLLLSGSGRSSSNEVQLSCYDTIFKAPIPESTRAYHLQDA
VSLFTSYLSEVSS
NT seq 3102 nt   +upstreamnt  +downstreamnt
atggaggttgatttagggaatcctgaacaacttattgtttctcagtcacaatgtaaaaga
agaaaaatttctgctttagatcagattttgggcgagaacgaagctgatttacctaccttg
cgatctcctgattattttactgagccatgcttgagtgaattggctgttagggagcttatg
agttcagggtattgcagtaaagttgaaaattttactgttgggaggtttggttatggattt
gtaaaattttctggggaaacagatgttagggggttggatttggatcgaattgttaagttt
agcaaacatgaggtgattgtatatgaagatgaaaatgacaagcccccagttggcatgggg
cttaacaagcctgctgaagtaactttgctactggaaatacgatcctccaaacactgtgac
gtggattcttctagagatctggtggagaaattaagacttagaacagagagacaaggagca
tgttttatctcatttgatccatcaaatggagaatggaaattcttcgttcagcatttcagc
agatttggtttgaatgatgaggaagaagatgaagatatgattattgatggtgtgtctcct
gaagttcaagatcctgcggatatgatcggagcagacgtttctgacattgatgaagaaacc
tgtttagccaatacaactgacctctcacattctcttcctgctcatcttgggttagatcct
gtaaagatgaaagaaatgagaatgctgatgtttccagcagaagaagaggatatagatgat
tatcctggtgttccttttgatagaaaaccacaattcggtatagaatcttcaaaatcccct
ttgcagcataagttccagagagttagtccacctttaactcgcaagactccattggccttg
attgaatacaaacatggtagttttggctcggactcacctgggtccattttgttgacccaa
caaaataagggtgtgcttctaaagacaacaaagactgaaggtttcaagctggatgtcagg
cagcaaacacctataagtggaacctactcttgtaatgttgttgatgcggggttgttcatg
ggtagatcatttggagttggctgggggcctaatggtgttcttattcattctggcgctcca
gttggtagtaaagacaatcagtctttgtcctcaataatcaatttggagaaggttgcattt
gaccaagtagctagagatgaaaataaaaaggtcagggaggaacttgttgatttgtgtttt
gattcagccctccatcttcacaaggaaattactcatgaaaccaaagagttcggggaggga
ccctttgtgttaaagcttcaaagacttgtgtgtgatcgtctaatactttcagatgtatgt
cggagctatattggtgtcattgagaggcaattggaggttcctgacttatctccagcatcc
cgtgttcttctgatgcaccaagcaatgatttgggaattaataaaagtgcttttctcgaca
agacaattgagtgggcaattaaagtctcttgaagatgaggatgaggaagatatgatacct
gatgcgagagaaactgctgcagatgttgatcgagaagcacttccattgataaggagagca
gaattcagctattggttgcaagagagtgtttgtcacagggtacaggaagaagtaagttct
ttgaatgattcaagtgatctacaacatatgtttttacttctaactggtcggcagctggat
gctgctgtggaactggcagcttctagaggagatgtgcggcttgcatgtcttcttagccaa
gctggtggttcgatggttaatcgttctgatgttgctaggcagcttgatatttggagagtg
aatgggttggacttcaattttgttgagacagagaggattagggttcttgagttggttgct
ggcaacattcatagagcattgcatgatgtagacattgactggaaaaggtttctggggttg
ttgatgtggtatcagcttccaccagaaactgaattgcctattgtgttccgcacatatcag
aggcttctcaatgaaggaaaagctccgtctccagttccagtttatattgatgaaggacct
atagaagtgtcaatgaattggaatgcagttaaacattttgacctcggttactatcttatg
cttcttcatgccaatcaagaaattgatttcagtgctctaaagacgatgttcagtgccttt
gcttcaacaaatgatccccttgactaccatatgatctggcatcagcgagctgttttagaa
gccattggtgctttcagttctaatgatcttcatgtgctagacattagtttcatttctcag
ctgctatgccttggtcaatgtcattgggctgtctatgtggtacttcacatgcctcaccgt
gaagattgtccttatttgcaagctgctcttattagggaaatactcttccagtactgtgaa
acttggagttctcaggacttgcagcggcaatttatggaggatctaggtattccatcagca
tggttgaacgaggctctggcaacatattttaattattactctgaattccccaaagcccta
gaacactttttggagtgcggaaagtggcagaaagcgcacactatttttatgacttcagtt
gctcattctctttttctatcagaagaacactcagaaatatggaggctagcagcatccatg
gaggatcacaaatcagaaattgaagattgggatctgggagctggaatatatatatctttt
tatttgttgagaagttctttgctggaggacagtgacactatgaatcaagacactatcgaa
aacaaagacaatgcttgtgcagactttatcagtcgcttaaacaactctttggctgtttgg
acaaacagattgcctgtcaaagcgagggtggtttattcgaaaatggctgaggagatatgc
agtttgctgctttctggtagcggtagaagttcatcaaatgaggtccagctaagctgctac
gataccatattcaaagcacctatacctgaatctacacgcgcataccatttgcaggatgct
gtgtcactttttacatcttacctttctgaggtgtcgtcatag

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