KEGG   Solanum pennellii: 107023062
Entry
107023062         CDS       T04130                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
spen  Solanum pennellii
Pathway
spen03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107023062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107023062
   03016 Transfer RNA biogenesis [BR:spen03016]
    107023062
   03012 Translation factors [BR:spen03012]
    107023062
   04131 Membrane trafficking [BR:spen04131]
    107023062
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spen04147]
    107023062
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     107023062
Transfer RNA biogenesis [BR:spen03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    107023062
Translation factors [BR:spen03012]
 Eukaryotic type
  Elongation factors
   107023062
Membrane trafficking [BR:spen04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    107023062
Exosome [BR:spen04147]
 Exosomal proteins
  Proteins found in most exosomes
   107023062
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 AAA_22 FlpD SRPRB
Other DBs
NCBI-GeneID: 107023062
NCBI-ProteinID: XP_015079096
Position
6:4478394..4480873
AA seq 448 aa
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVALNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVVKNVDKKDPTGAKVTKAAQKKGK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgggtaaggaaaagattcacatcagtattgtggtcattggtcatgtcgactctggaaag
tctactaccactggtcacttgatctacaagcttggtggtattgacaagcgtgttattgag
aggttcgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctt
gacaaacttaaggctgaacgtgagcgtggtatcactattgatattgctttatggaagttt
gagaccactaagtactactgcactgtgattgatgcccccggacacagggactttatcaag
aacatgatcactggtacctcccaggctgactgtgctgtcctcattattgactccaccact
ggtggtttcgaagctggtatctcaaaagatggtcagacccgtgaacatgcattgcttgct
ttcacccttggtgtcaagcaaatgatctgctgctgtaacaagatggatgctaccaccccc
aagtactcaaaggctaggtatgatgaaatcgtgaaggaagtttcttcctacctcaagaag
gttggttacaaccctgacaaaatcccatttgttcccatctctggttttgaaggagataat
atgattgagaggtctaccaacctcgactggtacaagggaccaaccctccttgaggctctc
gaccagattaatgagcccaagaggccatcagacaaaccactccgactcccacttcaggat
gtttacaagattggtggtattggaactgtcccagttggtcgtgtagagactggcgtaatc
aagcctggtatggttgtgacctttggccctactggtttgacaactgaagtcaagtctgtt
gagatgcaccacgaagctctccaggaggcgctccctggagacaatgttgggttcaatgtt
aagaatgttgctgttaaggatcttaagcgtggttacgttgccttaaactccaaggatgac
ccagctaagggggcagccagtttcactgcccaggtcatcatcatgaaccatcctggccag
attggaaatggatatgcaccagtgcttgactgccacacttcccacattgctgtcaagttt
gctgagatcttgaccaagattgacaggcgttcaggtaaggaacttgagaaggagcctaag
ttcttgaagaatggtgatgctggtatggttaagatgattcccaccaagcccatggttgtt
gagacctttgccgaatacccaccattgggtcgttttgctgtgagggacatgaggcaaact
gttgctgtgggtgttgtcaagaatgttgacaagaaggacccaactggtgccaaggtcacc
aaggctgcacagaagaagggaaagtag

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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