KEGG   Solanum pennellii: 107031835
Entry
107031835         CDS       T04130                                 
Name
(RefSeq) small RNA degrading nuclease 1-like
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
spen  Solanum pennellii
Pathway
spen03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107031835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spen03009]
    107031835
Ribosome biogenesis [BR:spen03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    107031835
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 BRAP2 HIP1_clath_bdg zf-C2HE
Other DBs
NCBI-GeneID: 107031835
NCBI-ProteinID: XP_015088807
Position
10:80749117..80754147
AA seq 497 aa
MESKLESAKKEVLAEIVKLAQKREMKGSKGGWKDFLRSYDKKLGVSLSDPSKRSIDVLLA
FLKTFSEDDLKIFDKVFQCHSNRDAVEKLQKSSPDSECPEQRLVRLTFEHPQYPIDYSFP
SHEEDWLVTKRSKKSNFIQSKDMVAIDCEMVLCQDGTEALVRICAVDRNLEVKLNEFVNP
NKPVVDYRTDITGITAGDLEGVSCSLADVQTSLKKLLSHGTILVGHSLHNDLRALKMDHA
RVIDTSYVFKYQGQAFSRRPSLSNLCKSVLGFDLRKIGSPHNCLDDAITAMKLVLSKLEC
GGDNIIPLVCEEAQEPAMSKLLVHRIPAAVHSQELHKVIPGDFTVEVKANKKGQADKYSA
LINFKTQHEANEAFDKLEGNQEKDIGGRPQKLVSFHLDSGVLGSCYVRKMDANNDSKDKE
VTPKKRSLEAEEAIVESKKPRTEDQCTELKEAAGAGCNQCETHSMEIEKLKKDLAHRDEE
ISALNKIIVNLVRKQGF
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggaatcgaaacttgaatcagccaagaaagaggttcttgctgaaattgtaaagttggct
caaaagcgggagatgaagggaagtaaaggagggtggaaagattttttgagatcctacgac
aagaagcttggggttagcttgagtgacccatccaagaggtccattgatgtgctgctggca
tttttaaagacgtttagtgaagatgatttaaagatttttgataaggtgtttcaatgtcat
tcaaaccgtgacgctgttgagaagctccagaaaagttccccggacagcgaatgccctgaa
cagagactcgttcgcttaacttttgagcaccctcaatatccgatagactactcatttcca
tcacacgaggaggactggttagtcaccaaaaggagtaaaaaatctaatttcattcaatca
aaggacatggttgcaatcgattgtgaaatggtcctttgccaagatggcactgaagcttta
gtcagaatctgtgctgtggaccgtaatttagaggttaaactcaatgaatttgtgaatccc
aacaaaccagttgtagattacagaactgacattactggcataactgctggagatttagaa
ggagtttcttgttcattggctgatgtacagacatccctgaagaagctattatcacatgga
accatattggttggtcatagtttacacaatgatcttcgtgctttgaagatggatcatgca
agagtgattgacacatcatatgtattcaaatatcagggtcaagcttttagtagaagacct
tctttaagcaacttgtgtaagtctgtgttagggtttgaccttcgaaagataggctctcca
cataattgtctagatgatgcgattactgcaatgaaacttgttctttccaagcttgaatgt
ggaggtgataatatcataccattggtttgtgaggaggcgcaggagcccgcgatgtcaaag
ctacttgtccacagaatacctgcggctgttcatagtcaagagttgcacaaagttattcct
ggcgactttactgtggaagttaaggctaataaaaaggggcaagcagacaagtattctgcc
ttgatcaacttcaaaactcagcacgaggcgaatgaggcattcgataaacttgaaggcaac
caagagaaggatattggtggacgaccacagaagctcgtttcgtttcatcttgattctggt
gtattagggtcttgttatgttcgtaagatggatgccaataatgattctaaagataaagag
gtcacaccaaagaagaggtcacttgaagctgaagaggccattgtagagtcaaagaaacca
aggacagaagaccaatgtacagaactcaaggaggctgctggtgcaggttgtaatcagtgt
gaaactcattcgatggagattgagaaactaaagaaagatttagcccacagagacgaagaa
atctccgcgttgaacaaaatcatcgttaaccttgtgaggaaacaaggattttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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